RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 DAZ3Q9NR90 486 aaKnown RBP6.84□□□□□ -1.31
PTPN20-202ENST00000374339 PAX4O43316 350 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 NHLRC4P0CG21 123 aaPredicted RBP6.83□□□□□ -1.32
PTPN20-202ENST00000374339 BTF3P20290 206 aaKnown RBP6.83□□□□□ -1.32
PTPN20-202ENST00000374339 UBE2D3P61077 147 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 UBE2D2P62837 147 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 COTL1Q14019 142 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 C12orf74Q32Q52 190 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 OR10D4PQ8NGN7 298 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 C11orf45Q8TAV5 145 aa6.83□□□□□ -1.32
PTPN20-202ENST00000374339 A0A096LNJ9 63 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 GAGE12JA6NER3 117 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 F5H768 121 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 TSHBP01222 138 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 GAGE1Q13065 139 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 GAGE4Q13068 117 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 GAGE5Q13069 117 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 TMEM97Q5BJF2 176 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 NEGR1Q7Z3B1 354 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 LINC00518Q8N0U6 118 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 CYSLTR1Q9Y271 337 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 ATP5LO75964 103 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 GYPEP15421 78 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 HTN3P15516 51 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 SH2D6Q7Z4S9 175 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 TOMM6Q96B49 74 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 MAP1LC3CQ9BXW4 147 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 Q9UF83 564 aa6.82□□□□□ -1.32
PTPN20-202ENST00000374339 H3BNG1 76 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 LINC00694P0DN24 101 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 KRTDAPP60985 99 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 DEFA6Q01524 100 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 ODF1Q14990 250 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 C2orf66Q6UXQ4 117 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 PHLDA1Q8WV24 401 aaPredicted RBP6.81□□□□□ -1.32
PTPN20-202ENST00000374339 GTSF1LQ9H1H1 148 aa6.81□□□□□ -1.32
PTPN20-202ENST00000374339 CMYA5Q8N3K9 4069 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 LOC100131303A0A0U1RQF7 123 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.8□□□□□ -1.32
PTPN20-202ENST00000374339 SMAGPQ0VAQ4 97 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 MRPL23Q16540 153 aaKnown RBP6.8□□□□□ -1.32
PTPN20-202ENST00000374339 Q6ZTC4 211 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 SCGB3A1Q96QR1 104 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 ICOSQ9Y6W8 199 aa6.8□□□□□ -1.32
PTPN20-202ENST00000374339 IGHV3-38A0A0C4DH36 116 aa6.79□□□□□ -1.32
PTPN20-202ENST00000374339 A0A0J9YY99 117 aa6.79□□□□□ -1.32
PTPN20-202ENST00000374339 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
PTPN20-202ENST00000374339 SMIM6P0DI80 62 aa6.79□□□□□ -1.32
PTPN20-202ENST00000374339 NANOS2P60321 138 aaKnown RBP6.79□□□□□ -1.32
PTPN20-202ENST00000374339 ERASQ7Z444 233 aa6.79□□□□□ -1.32
PTPN20-202ENST00000374339 VSIG2Q96IQ7 327 aa6.79□□□□□ -1.32
PTPN20-202ENST00000374339 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 DEFB131BA0A096LNP1 70 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 TRAV10A0A0B4J240 114 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 C20orf202A1L168 122 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 SYS1-DBNDD2H3BUS1 97 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 NPSP0C0P6 89 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 JOSD1Q15040 202 aaPredicted RBP6.78□□□□□ -1.32
PTPN20-202ENST00000374339 PAPPA-AS1Q5QFB9 102 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 PET117Q6UWS5 81 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 Q6ZN92 141 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 SPATA12Q7Z6I5 190 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 TIMM17AQ99595 171 aa6.78□□□□□ -1.32
PTPN20-202ENST00000374339 TENM3Q9P273 2699 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 TRBV6-8A0A0A6YYG3 113 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 H7C423 109 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 SCGB1D1O95968 90 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
PTPN20-202ENST00000374339 LINC00173Q6ZV60 143 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 DEFB104AQ8WTQ1 72 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 PYGO1Q9Y3Y4 419 aa6.77□□□□□ -1.33
PTPN20-202ENST00000374339 IGIPA6NJ69 53 aa6.76□□□□□ -1.33
PTPN20-202ENST00000374339 UBE2L6O14933 153 aa6.76□□□□□ -1.33
PTPN20-202ENST00000374339 PRSS1P07477 247 aa6.76□□□□□ -1.33
PTPN20-202ENST00000374339 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
PTPN20-202ENST00000374339 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
PTPN20-202ENST00000374339 H0Y8G0 127 aa6.75□□□□□ -1.33
PTPN20-202ENST00000374339 PYY3Q5JQD4 70 aa6.75□□□□□ -1.33
PTPN20-202ENST00000374339 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.74□□□□□ -1.33
PTPN20-202ENST00000374339 A0A096LPF7 62 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 IGKV2-29A2NJV5 120 aaPredicted RBP6.74□□□□□ -1.33
PTPN20-202ENST00000374339 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
PTPN20-202ENST00000374339 PKIAP61925 76 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 LGALS9CQ6DKI2 356 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 DGAT2L7PQ6IED9 249 aa6.74□□□□□ -1.33
PTPN20-202ENST00000374339 MRPL52Q86TS9 123 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms