RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PCP2Q8IVA1 136 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 C1orf158Q8N1D5 194 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 RNF183Q96D59 192 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 JPT2Q9H910 190 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 MYO9AB2RTY4 2548 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 A0A1B0GWB2 263 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 LEPROTO15243 131 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 LY6G6DO95868 133 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 P0DMU3 169 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 FAM231AP0DMU4 169 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 FAM231CP0DMU5 169 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 HTN1P15515 57 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 TIRAPP58753 221 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 LINC00482Q8N8I6 264 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 HIST1H4GQ99525 98 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 PRADC1Q9BSG0 188 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 XCL2Q9UBD3 114 aa6.31□□□□□ -1.4
SNRNP40-202ENST00000373720 IGLV4-69A0A075B6H9 119 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 IGLV4-3A0A075B6K6 122 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 IGKV2D-26A0A0A0MRZ7 120 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 TRAV8-6A0A0B4J262 113 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 K7EQD1 137 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 CRLF1O75462 422 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 FABP2P12104 132 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 SCGB1D4Q6XE38 83 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 CELSR1Q9NYQ6 3014 aa6.3□□□□□ -1.4
SNRNP40-202ENST00000373720 A0A1W2PRX2 142 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 ZNF815PA8K554 130 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 TMEM238C9JI98 176 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 K7EP13 123 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 CCL25O15444 150 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 SPRY2O43597 315 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 LGALS3P17931 250 aaKnown RBP6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 APOC4P55056 127 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 HERVK_113P63121 156 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 NEGR1Q7Z3B1 354 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 SLC25A29Q8N8R3 303 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 CSNK1G2-AS1Q8NCQ2 148 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 UNC79Q9P2D8 2635 aa6.29□□□□□ -1.4
SNRNP40-202ENST00000373720 PDZD2O15018 2839 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 SVEP1Q4LDE5 3571 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 TRGV1A0A0A0MS02 117 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 TEX48A0A1B0GUV7 120 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 J3QQQ9 107 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 TIMM17BO60830 172 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 WFDC9Q8NEX5 89 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 TMEM101Q96IK0 257 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 UBE2D4Q9Y2X8 147 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 MAP1AP78559 2803 aaPredicted RBP6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 DOPEY2Q9Y3R5 2298 aa6.28□□□□□ -1.4
SNRNP40-202ENST00000373720 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 FLNAP21333 2647 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 UBE2D3P61077 147 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 UBE2D2P62837 147 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 RPL39P62891 51 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 SRSF9Q13242 221 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 ZNF124Q15973 351 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 CHCHD7Q9BUK0 85 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 HIVEP2P31629 2446 aa6.27□□□□□ -1.41
SNRNP40-202ENST00000373720 AGRNO00468 2067 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 IGHV1-58A0A0C4DH39 117 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 IFITM1P13164 125 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 CIRBPQ14011 172 aaKnown RBP6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 ZNRF2Q8NHG8 242 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 CITED1Q99966 193 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 GEMIN7Q9H840 131 aaKnown RBP6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 MRPL16Q9NX20 251 aaKnown RBP6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 SELENOKQ9Y6D0 94 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 TENM4Q6N022 2769 aa6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 HELZ2Q9BYK8 2649 aaKnown RBP6.26□□□□□ -1.41
SNRNP40-202ENST00000373720 TRBV20-1A0A075B6N2 111 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 A0A0J9YY99 117 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 F8W1H4 67 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 K7EP34 96 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 GIG44P09565 113 aaPredicted RBP6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 ZNF22P17026 224 aaPredicted RBP6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 AMMECR1LQ6DCA0 310 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 MAPKAPK5-AS1Q8N8E1 139 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 C11orf44Q8N8P7 122 aa6.25□□□□□ -1.41
SNRNP40-202ENST00000373720 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SNRNP40-202ENST00000373720 K7ERU9 68 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms