RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 SPXQ9BT56 116 aa12.14□□□□□ -0.47
HDAC8-206ENST00000373571 A0A1W2PRX2 142 aa12.13□□□□□ -0.47
HDAC8-206ENST00000373571 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
HDAC8-206ENST00000373571 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
HDAC8-206ENST00000373571 MTURNQ8N3F0 131 aa12.13□□□□□ -0.47
HDAC8-206ENST00000373571 XCL2Q9UBD3 114 aa12.13□□□□□ -0.47
HDAC8-206ENST00000373571 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
HDAC8-206ENST00000373571 CRYBA4P53673 196 aa12.12□□□□□ -0.47
HDAC8-206ENST00000373571 CHCHD7Q9BUK0 85 aa12.12□□□□□ -0.47
HDAC8-206ENST00000373571 PRO0461Q9UI25 63 aa12.12□□□□□ -0.47
HDAC8-206ENST00000373571 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 MRPS36P82909 103 aaKnown RBP12.11□□□□□ -0.47
HDAC8-206ENST00000373571 BEAN1Q3B7T3 259 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 RNASE13Q5GAN3 156 aaKnown RBP12.11□□□□□ -0.47
HDAC8-206ENST00000373571 STHQ8IWL8 128 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 APCP25054 2843 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 TRAV25A0A0B4J276 109 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 LOC107984156A0A0G2JMH3 177 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 RS1O15537 224 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 CFC1P0CG37 223 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 FHL3Q13643 280 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 SFTA2Q6UW10 78 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 ARL17AQ8IVW1 177 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
HDAC8-206ENST00000373571 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
HDAC8-206ENST00000373571 UBE2D4Q9Y2X8 147 aa12.1□□□□□ -0.47
HDAC8-206ENST00000373571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-206ENST00000373571 IGHV3-38A0A0C4DH36 116 aa12.1□□□□□ -0.47
HDAC8-206ENST00000373571 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-206ENST00000373571 CCL24O00175 119 aa12.1□□□□□ -0.47
HDAC8-206ENST00000373571 AZU1P20160 251 aa12.1□□□□□ -0.47
HDAC8-206ENST00000373571 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
HDAC8-206ENST00000373571 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
HDAC8-206ENST00000373571 UBE2D3P61077 147 aa12.09□□□□□ -0.47
HDAC8-206ENST00000373571 UBE2D2P62837 147 aa12.09□□□□□ -0.47
HDAC8-206ENST00000373571 ETDBQ3ZM63 59 aa12.09□□□□□ -0.47
HDAC8-206ENST00000373571 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
HDAC8-206ENST00000373571 TIMM21Q9BVV7 248 aa12.09□□□□□ -0.47
HDAC8-206ENST00000373571 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.47
HDAC8-206ENST00000373571 C10orf126Q8N4M7 172 aa12.08□□□□□ -0.47
HDAC8-206ENST00000373571 PSMB2P49721 201 aa12.08□□□□□ -0.48
HDAC8-206ENST00000373571 COTL1Q14019 142 aa12.08□□□□□ -0.48
HDAC8-206ENST00000373571 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
HDAC8-206ENST00000373571 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
HDAC8-206ENST00000373571 LYRM7Q5U5X0 104 aa12.07□□□□□ -0.48
HDAC8-206ENST00000373571 TRAV8-3A0A0A6YYJ7 113 aa12.07□□□□□ -0.48
HDAC8-206ENST00000373571 A4D1N5 150 aa12.07□□□□□ -0.48
HDAC8-206ENST00000373571 TMEM238C9JI98 176 aa12.07□□□□□ -0.48
HDAC8-206ENST00000373571 PRO1854Q9UHT4 67 aa12.07□□□□□ -0.48
HDAC8-206ENST00000373571 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
HDAC8-206ENST00000373571 A0A0J9YXY3 114 aa12.06□□□□□ -0.48
HDAC8-206ENST00000373571 TINCRA0A1B0GVN0 87 aa12.06□□□□□ -0.48
HDAC8-206ENST00000373571 Q6ZUT4 128 aa12.06□□□□□ -0.48
HDAC8-206ENST00000373571 CITED2Q99967 270 aaPredicted RBP12.06□□□□□ -0.48
HDAC8-206ENST00000373571 HIST2H2BCQ6DN03 193 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 CUBNO60494 3623 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 TRGV1A0A0A0MS02 117 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 ADARB2-AS1A8MUL3 147 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 J3QR89 54 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 MUSTN1Q8IVN3 82 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 IL17DQ8TAD2 202 aa12.05□□□□□ -0.48
HDAC8-206ENST00000373571 CHD6Q8TD26 2715 aa12.04□□□□□ -0.48
HDAC8-206ENST00000373571 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
HDAC8-206ENST00000373571 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
HDAC8-206ENST00000373571 EPG5Q9HCE0 2579 aa12.03□□□□□ -0.48
HDAC8-206ENST00000373571 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.48
HDAC8-206ENST00000373571 TCL1BO95988 128 aa12.02□□□□□ -0.48
HDAC8-206ENST00000373571 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.48
HDAC8-206ENST00000373571 SPINK8P0C7L1 97 aa12.02□□□□□ -0.49
HDAC8-206ENST00000373571 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
HDAC8-206ENST00000373571 TMEM263Q8WUH6 116 aaKnown RBP12.02□□□□□ -0.49
HDAC8-206ENST00000373571 TRBV20-1A0A075B6N2 111 aa12.01□□□□□ -0.49
HDAC8-206ENST00000373571 A0A0B4J2C4 111 aa12.01□□□□□ -0.49
HDAC8-206ENST00000373571 ZNF418Q8TF45 676 aaPredicted RBP12.01□□□□□ -0.49
HDAC8-206ENST00000373571 GEMIN7Q9H840 131 aaKnown RBP12.01□□□□□ -0.49
HDAC8-206ENST00000373571 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
HDAC8-206ENST00000373571 SCGB1C2P0DMR2 95 aa12.01□□□□□ -0.49
HDAC8-206ENST00000373571 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
HDAC8-206ENST00000373571 LITAFQ99732 161 aa12.01□□□□□ -0.49
HDAC8-206ENST00000373571 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
HDAC8-206ENST00000373571 A8MZ25 164 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 IGHV3-33P01772 117 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 KRTAP1-1Q07627 177 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 DGAT2L7PQ6IED9 249 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 Q6ZTI0 123 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 YAE1D1Q9NRH1 226 aa12□□□□□ -0.49
HDAC8-206ENST00000373571 INSL3P51460 131 aa11.99□□□□□ -0.49
HDAC8-206ENST00000373571 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
HDAC8-206ENST00000373571 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
HDAC8-206ENST00000373571 K7EQD1 137 aa11.98□□□□□ -0.49
HDAC8-206ENST00000373571 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
HDAC8-206ENST00000373571 C16orf95Q9H693 158 aa11.98□□□□□ -0.49
HDAC8-206ENST00000373571 FLNAP21333 2647 aaKnown RBP11.98□□□□□ -0.49
HDAC8-206ENST00000373571 H7C2G1 150 aa11.98□□□□□ -0.49
HDAC8-206ENST00000373571 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms