RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 NPC2P61916 151 aa13.2□□□□□ -0.3
HNF4A-203ENST00000372920 Q6ZSV7 163 aa13.2□□□□□ -0.3
HNF4A-203ENST00000372920 DOPEY2Q9Y3R5 2298 aa13.2□□□□□ -0.3
HNF4A-203ENST00000372920 PRM2P04554 102 aa13.2□□□□□ -0.3
HNF4A-203ENST00000372920 MIAQ16674 131 aa13.19□□□□□ -0.3
HNF4A-203ENST00000372920 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
HNF4A-203ENST00000372920 GAGE2EQ4V326 116 aa13.19□□□□□ -0.3
HNF4A-203ENST00000372920 GAGE2DQ9UEU5 116 aa13.19□□□□□ -0.3
HNF4A-203ENST00000372920 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
HNF4A-203ENST00000372920 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
HNF4A-203ENST00000372920 TRAV8-4A0A0B4J246 113 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 H3BMM0 161 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 DEFB112Q30KQ8 113 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 UBE2WQ96B02 151 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 SORL1Q92673 2214 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.32e-8■■■□□ 14.6
HNF4A-203ENST00000372920 C2orf82Q6UX34 121 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 Q6ZSN1 163 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 H7C423 109 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-203ENST00000372920 UBE2D4Q9Y2X8 147 aa13.18□□□□□ -0.3
HNF4A-203ENST00000372920 PRRC2AP48634 2157 aaKnown RBP13.17□□□□□ -0.3
HNF4A-203ENST00000372920 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
HNF4A-203ENST00000372920 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
HNF4A-203ENST00000372920 TMEM89A2RUT3 159 aa13.17□□□□□ -0.3
HNF4A-203ENST00000372920 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
HNF4A-203ENST00000372920 SPANXA1Q9NS26 97 aa13.16□□□□□ -0.3
HNF4A-203ENST00000372920 B4DSR2 109 aa13.16□□□□□ -0.3
HNF4A-203ENST00000372920 CLEC2BQ92478 149 aa13.16□□□□□ -0.3
HNF4A-203ENST00000372920 COX6CP09669 75 aa13.15□□□□□ -0.3
HNF4A-203ENST00000372920 CELSR2Q9HCU4 2923 aa13.15□□□□□ -0.3
HNF4A-203ENST00000372920 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
HNF4A-203ENST00000372920 DUX3Q96PT4 197 aa13.15□□□□□ -0.3
HNF4A-203ENST00000372920 NDUFV3P56181 108 aaKnown RBP13.15□□□□□ -0.31
HNF4A-203ENST00000372920 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.31
HNF4A-203ENST00000372920 DEFB131AP59861 70 aa13.14□□□□□ -0.31
HNF4A-203ENST00000372920 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
HNF4A-203ENST00000372920 GAGE5Q13069 117 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 GAGE6Q13070 117 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
HNF4A-203ENST00000372920 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
HNF4A-203ENST00000372920 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
HNF4A-203ENST00000372920 DAND5Q8N907 189 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 SPG11Q96JI7 2443 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 IGHV3-38A0A0C4DH36 116 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 H3BT86 120 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 YAE1D1Q9NRH1 226 aa13.13□□□□□ -0.31
HNF4A-203ENST00000372920 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
HNF4A-203ENST00000372920 LST1O00453 97 aa13.11□□□□□ -0.31
HNF4A-203ENST00000372920 CDKN2A-AS1Q9UH64 79 aa13.11□□□□□ -0.31
HNF4A-203ENST00000372920 ITPR1Q14643 2758 aa13.11□□□□□ -0.31
HNF4A-203ENST00000372920 TTC32Q5I0X7 151 aa13.11□□□□□ -0.31
HNF4A-203ENST00000372920 SS18L2Q9UHA2 77 aa13.11□□□□□ -0.31
HNF4A-203ENST00000372920 CHD8Q9HCK8 2581 aa13.1□□□□□ -0.31
HNF4A-203ENST00000372920 TIMM17BO60830 172 aa13.1□□□□□ -0.31
HNF4A-203ENST00000372920 IFITM1P13164 125 aa13.1□□□□□ -0.31
HNF4A-203ENST00000372920 ZNF415Q09FC8 603 aa13.1□□□□□ -0.31
HNF4A-203ENST00000372920 Q6Q795 121 aa13.1□□□□□ -0.31
HNF4A-203ENST00000372920 B5MCH6 92 aa13.1□□□□□ -0.31
HNF4A-203ENST00000372920 PIK3CD-AS1Q5SR53 167 aa13.09□□□□□ -0.31
HNF4A-203ENST00000372920 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.09□□□□□ -0.31
HNF4A-203ENST00000372920 UBE2E2Q96LR5 201 aa13.09□□□□□ -0.31
HNF4A-203ENST00000372920 A8MTW9 85 aa13.08□□□□□ -0.31
HNF4A-203ENST00000372920 TMEM101Q96IK0 257 aa13.08□□□□□ -0.31
HNF4A-203ENST00000372920 CREBBPQ92793 2442 aa13.08□□□□□ -0.32
HNF4A-203ENST00000372920 NDUFA1O15239 70 aa13.08□□□□□ -0.32
HNF4A-203ENST00000372920 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
HNF4A-203ENST00000372920 SLURP1P55000 103 aa13.08□□□□□ -0.32
HNF4A-203ENST00000372920 IGHV3-53P01767 116 aa13.07□□□□□ -0.32
HNF4A-203ENST00000372920 DEFB136Q30KP8 78 aa13.07□□□□□ -0.32
HNF4A-203ENST00000372920 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 SVIPQ8NHG7 77 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 CITED2Q99967 270 aaPredicted RBP13.06□□□□□ -0.32
HNF4A-203ENST00000372920 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 TIRAPP58753 221 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 C11orf72Q8NBR9 251 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 DNAJC30Q96LL9 226 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 COX6A2Q02221 97 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 LINC01587Q99440 93 aa13.06□□□□□ -0.32
HNF4A-203ENST00000372920 ZNF702PQ9H963 129 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 CCDC179H3BU77 68 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 DEFB121Q5J5C9 76 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 NRGNQ92686 78 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 SPTBN4Q9H254 2564 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 GAGE7O76087 117 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 GAGE12FP0CL80 117 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 GAGE12GP0CL81 117 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 GAGE12IP0CL82 117 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 GAGE4Q13068 117 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 VPREB3Q9UKI3 123 aa13.05□□□□□ -0.32
HNF4A-203ENST00000372920 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
HNF4A-203ENST00000372920 PRORYQ9H606 182 aa13.04□□□□□ -0.32
HNF4A-203ENST00000372920 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
HNF4A-203ENST00000372920 FAM240AA0A1B0GVK7 77 aa13.03□□□□□ -0.32
HNF4A-203ENST00000372920 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
HNF4A-203ENST00000372920 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
HNF4A-203ENST00000372920 Q9H8V8 135 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms