RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ARHGAP32A7KAX9 2087 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 K7EIM0 57 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 IGKV1-17P01599 117 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 C6orf226Q5I0X4 101 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 STHQ8IWL8 128 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 C17orf77Q96MU5 243 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 TIMM21Q9BVV7 248 aa6.59□□□□□ -1.35
ATG4A-203ENST00000372232 PRB1P04280 392 aa6.59□□□□□ -1.36
ATG4A-203ENST00000372232 SYNJ2BPP57105 145 aa6.59□□□□□ -1.36
ATG4A-203ENST00000372232 VMO1Q7Z5L0 202 aa6.59□□□□□ -1.36
ATG4A-203ENST00000372232 LINC01561Q8N1V8 128 aa6.59□□□□□ -1.36
ATG4A-203ENST00000372232 DAND5Q8N907 189 aa6.59□□□□□ -1.36
ATG4A-203ENST00000372232 Q96MF0 132 aa6.59□□□□□ -1.36
ATG4A-203ENST00000372232 CSMD1Q96PZ7 3565 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 ZNF80P51504 273 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-203ENST00000372232 UBE2E1P51965 193 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 LYZP61626 148 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 DYNAPQ8N1N2 210 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 KLK15Q9H2R5 256 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 TMEM89A2RUT3 159 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 M0R3E3 92 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 FHL2Q14192 279 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 C2orf66Q6UXQ4 117 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-203ENST00000372232 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
ATG4A-203ENST00000372232 ZNF462Q96JM2 2506 aa6.57□□□□□ -1.36
ATG4A-203ENST00000372232 TRGV3P03979 118 aa6.57□□□□□ -1.36
ATG4A-203ENST00000372232 LGALS3P17931 250 aaKnown RBP6.57□□□□□ -1.36
ATG4A-203ENST00000372232 MINOS1Q5TGZ0 78 aa6.57□□□□□ -1.36
ATG4A-203ENST00000372232 Q8N6K4 173 aa6.57□□□□□ -1.36
ATG4A-203ENST00000372232 ZNF491Q8N8L2 437 aa6.57□□□□□ -1.36
ATG4A-203ENST00000372232 MINOS1-NBL1R4GNA1 71 aa6.57□□□□□ -1.36
ATG4A-203ENST00000372232 H3BRN7 92 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 ZNF843Q8N446 348 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 TRAV26-2A0A0B4J265 109 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 A0A0J9YX75 114 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 BUB3O43684 328 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 SLURP1P55000 103 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 PDE6HQ13956 83 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 MED13LQ71F56 2210 aa6.56□□□□□ -1.36
ATG4A-203ENST00000372232 IGLV11-55A0A075B6I3 123 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 C19orf84I3L1E1 186 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 PRB4P10163 310 aaPredicted RBP6.55□□□□□ -1.36
ATG4A-203ENST00000372232 NDPQ00604 133 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 Q6ZSN1 163 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 WFDC11Q8NEX6 87 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 TRAV8-3A0A0A6YYJ7 113 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 GNLYP22749 145 aa6.55□□□□□ -1.36
ATG4A-203ENST00000372232 IGHV1-69DA0A0B4J2H0 117 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 I3L3M4 83 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 LEPROTO15243 131 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 LMO4P61968 165 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 Q6JHZ5 121 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 FP248Q71RG6 208 aaPredicted RBP6.54□□□□□ -1.36
ATG4A-203ENST00000372232 FAM19A1Q7Z5A9 133 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 BPESC1Q9GZL8 116 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 S4R3C0 116 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 VPS13CQ709C8 3753 aa6.54□□□□□ -1.36
ATG4A-203ENST00000372232 IGHV3OR16-10A0A075B7F0 116 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 IGKV2-40A0A087WW87 121 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-203ENST00000372232 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 TSHBP01222 138 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 IGKV2D-40P01614 121 aaPredicted RBP6.53□□□□□ -1.36
ATG4A-203ENST00000372232 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 TMEM243Q9BU79 118 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 WNK2Q9Y3S1 2297 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 AKAP6Q13023 2319 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 PRSS2P07478 247 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 Q8N9W7 124 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 IL17DQ8TAD2 202 aa6.53□□□□□ -1.36
ATG4A-203ENST00000372232 COL12A1Q99715 3063 aa6.52□□□□□ -1.37
ATG4A-203ENST00000372232 SPTAN1Q13813 2472 aaKnown RBP6.52□□□□□ -1.37
ATG4A-203ENST00000372232 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 FAM223BA6NKX1 122 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 INAFM2P0DMQ5 153 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 SAA4P35542 130 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 MRPS36P82909 103 aaKnown RBP6.51□□□□□ -1.37
ATG4A-203ENST00000372232 DAZ2Q13117 558 aaKnown RBP6.51□□□□□ -1.37
ATG4A-203ENST00000372232 DAZ4Q86SG3 579 aaKnown RBP6.51□□□□□ -1.37
ATG4A-203ENST00000372232 FAM223AQ8IWN6 122 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 Q8TAT8 98 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 DAZ1Q9NQZ3 744 aaKnown RBP6.51□□□□□ -1.37
ATG4A-203ENST00000372232 DAZ3Q9NR90 486 aaKnown RBP6.51□□□□□ -1.37
ATG4A-203ENST00000372232 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 CCL24O00175 119 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 ZNF876PQ49A33 203 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 FAM222AQ5U5X8 452 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 LITAFQ99732 161 aa6.51□□□□□ -1.37
ATG4A-203ENST00000372232 IGHV3-23P01764 117 aa6.5□□□□□ -1.37
ATG4A-203ENST00000372232 CTSGP08311 255 aa6.5□□□□□ -1.37
ATG4A-203ENST00000372232 APRG1Q8IVJ8 170 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms