RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 IGLC6P0CF74 106 aa17.99■□□□□ 0.47
RAPGEF1-203ENST00000372195 NEXN-AS1Q8NBZ9 246 aa17.99■□□□□ 0.47
RAPGEF1-203ENST00000372195 LMO4P61968 165 aa17.98■□□□□ 0.47
RAPGEF1-203ENST00000372195 PCNX2A6NKB5 2137 aa17.98■□□□□ 0.47
RAPGEF1-203ENST00000372195 SVIPQ8NHG7 77 aa17.98■□□□□ 0.47
RAPGEF1-203ENST00000372195 REG3AQ06141 175 aa17.98■□□□□ 0.47
RAPGEF1-203ENST00000372195 PIK3CD-AS1Q5SR53 167 aa17.97■□□□□ 0.47
RAPGEF1-203ENST00000372195 NDUFV3P56181 108 aaKnown RBP17.97■□□□□ 0.47
RAPGEF1-203ENST00000372195 EIF4EBP1Q13541 118 aaPredicted RBP17.97■□□□□ 0.47
RAPGEF1-203ENST00000372195 SPANXB1Q9NS25 103 aaPredicted RBP17.96■□□□□ 0.47
RAPGEF1-203ENST00000372195 CDKN2A-AS1Q9UH64 79 aa17.96■□□□□ 0.47
RAPGEF1-203ENST00000372195 MBD6Q96DN6 1003 aa17.96■□□□□ 0.47
RAPGEF1-203ENST00000372195 TANC2Q9HCD6 1990 aa17.96■□□□□ 0.47
RAPGEF1-203ENST00000372195 A8MZ25 164 aa17.96■□□□□ 0.47
RAPGEF1-203ENST00000372195 TMEM89A2RUT3 159 aa17.96■□□□□ 0.46
RAPGEF1-203ENST00000372195 MLST8Q9BVC4 326 aa17.96■□□□□ 0.46
RAPGEF1-203ENST00000372195 FREM1Q5H8C1 2179 aa17.95■□□□□ 0.46
RAPGEF1-203ENST00000372195 CACNA1HO95180 2353 aa17.94■□□□□ 0.46
RAPGEF1-203ENST00000372195 FAM222AQ5U5X8 452 aa17.94■□□□□ 0.46
RAPGEF1-203ENST00000372195 PLCE1Q9P212 2302 aa17.94■□□□□ 0.46
RAPGEF1-203ENST00000372195 TMEM223A0PJW6 202 aa17.94■□□□□ 0.46
RAPGEF1-203ENST00000372195 NCOA6Q14686 2063 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF1-203ENST00000372195 DCANP1Q8TF63 244 aa17.93■□□□□ 0.46
RAPGEF1-203ENST00000372195 KIAA1549Q9HCM3 1950 aa17.93■□□□□ 0.46
RAPGEF1-203ENST00000372195 CHCHD10Q8WYQ3 142 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF1-203ENST00000372195 LINC00643Q86TS7 51 aa17.92■□□□□ 0.46
RAPGEF1-203ENST00000372195 LINC00482Q8N8I6 264 aa17.92■□□□□ 0.46
RAPGEF1-203ENST00000372195 HIGD2AQ9BW72 106 aa17.92■□□□□ 0.46
RAPGEF1-203ENST00000372195 TNFRSF13BO14836 293 aaPredicted RBP17.92■□□□□ 0.46
RAPGEF1-203ENST00000372195 RNF185Q96GF1 192 aa17.92■□□□□ 0.46
RAPGEF1-203ENST00000372195 IGLV4-3A0A075B6K6 122 aa17.91■□□□□ 0.46
RAPGEF1-203ENST00000372195 TRBV10-1A0A0K0K1A3 114 aa17.91■□□□□ 0.46
RAPGEF1-203ENST00000372195 C11orf45Q8TAV5 145 aa17.91■□□□□ 0.46
RAPGEF1-203ENST00000372195 PRM2P04554 102 aa17.91■□□□□ 0.46
RAPGEF1-203ENST00000372195 IGHV4-31P0DP07 118 aa17.91■□□□□ 0.46
RAPGEF1-203ENST00000372195 ENHOQ6UWT2 76 aa17.9■□□□□ 0.46
RAPGEF1-203ENST00000372195 PCNX3Q9H6A9 2034 aa17.9■□□□□ 0.46
RAPGEF1-203ENST00000372195 H3BQ85 93 aa17.9■□□□□ 0.46
RAPGEF1-203ENST00000372195 PKIGQ9Y2B9 76 aa17.9■□□□□ 0.46
RAPGEF1-203ENST00000372195 ZNF22P17026 224 aaPredicted RBP17.9■□□□□ 0.46
RAPGEF1-203ENST00000372195 C20orf197Q8N268 126 aa17.9■□□□□ 0.46
RAPGEF1-203ENST00000372195 SPTSSBQ8NFR3 76 aa17.89■□□□□ 0.45
RAPGEF1-203ENST00000372195 TRIAP1O43715 76 aa17.89■□□□□ 0.45
RAPGEF1-203ENST00000372195 Q6YL49 198 aa17.88■□□□□ 0.45
RAPGEF1-203ENST00000372195 LINC00574Q9H8X3 128 aa17.88■□□□□ 0.45
RAPGEF1-203ENST00000372195 CFAP126Q5VTH2 177 aa17.88■□□□□ 0.45
RAPGEF1-203ENST00000372195 DEFB114Q30KQ6 69 aa17.88■□□□□ 0.45
RAPGEF1-203ENST00000372195 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
RAPGEF1-203ENST00000372195 PCDH15Q96QU1 1955 aa17.87■□□□□ 0.45
RAPGEF1-203ENST00000372195 K7EQG2 157 aa17.87■□□□□ 0.45
RAPGEF1-203ENST00000372195 IGKV4-1P06312 121 aa17.87■□□□□ 0.45
RAPGEF1-203ENST00000372195 C4orf48Q5BLP8 95 aa17.87■□□□□ 0.45
RAPGEF1-203ENST00000372195 FBXL19-AS1Q494R0 122 aa17.87■□□□□ 0.45
RAPGEF1-203ENST00000372195 ALPK3Q96L96 1907 aa17.86■□□□□ 0.45
RAPGEF1-203ENST00000372195 ZFAND3Q9H8U3 227 aa17.86■□□□□ 0.45
RAPGEF1-203ENST00000372195 YPEL4Q96NS1 127 aa17.86■□□□□ 0.45
RAPGEF1-203ENST00000372195 LRCOL1A6NCL2 159 aa17.86■□□□□ 0.45
RAPGEF1-203ENST00000372195 BPY2O14599 106 aa17.85■□□□□ 0.45
RAPGEF1-203ENST00000372195 B9D2Q9BPU9 175 aa17.85■□□□□ 0.45
RAPGEF1-203ENST00000372195 XAGE1AQ9HD64 81 aa17.85■□□□□ 0.45
RAPGEF1-203ENST00000372195 C18orf65Q6ZTR6 163 aa17.84■□□□□ 0.45
RAPGEF1-203ENST00000372195 LINC00526Q96FQ7 95 aa17.84■□□□□ 0.45
RAPGEF1-203ENST00000372195 CRYGDP07320 174 aa17.83■□□□□ 0.45
RAPGEF1-203ENST00000372195 M0QY20 66 aa17.83■□□□□ 0.44
RAPGEF1-203ENST00000372195 LINC00308Q8TCZ7 52 aa17.83■□□□□ 0.44
RAPGEF1-203ENST00000372195 Q8N976 141 aa17.83■□□□□ 0.44
RAPGEF1-203ENST00000372195 A0A0U1RQV1 116 aa17.82■□□□□ 0.44
RAPGEF1-203ENST00000372195 LY6LH3BQJ8 138 aa17.82■□□□□ 0.44
RAPGEF1-203ENST00000372195 FAM19A1Q7Z5A9 133 aa17.82■□□□□ 0.44
RAPGEF1-203ENST00000372195 FAM19A5Q7Z5A7 132 aaPredicted RBP17.82■□□□□ 0.44
RAPGEF1-203ENST00000372195 KLK5Q9Y337 293 aaPredicted RBP17.82■□□□□ 0.44
RAPGEF1-203ENST00000372195 UFSP1Q6NVU6 142 aa17.82■□□□□ 0.44
RAPGEF1-203ENST00000372195 IGLV2-11P01706 119 aa17.81■□□□□ 0.44
RAPGEF1-203ENST00000372195 GAS8-AS1O95177 125 aa17.81■□□□□ 0.44
RAPGEF1-203ENST00000372195 INAFM1C9JVW0 142 aa17.81■□□□□ 0.44
RAPGEF1-203ENST00000372195 MRPS12O15235 138 aaKnown RBP17.81■□□□□ 0.44
RAPGEF1-203ENST00000372195 LOC100131303A0A0U1RQF7 123 aa17.8■□□□□ 0.44
RAPGEF1-203ENST00000372195 PRR9Q5T870 116 aa17.8■□□□□ 0.44
RAPGEF1-203ENST00000372195 WFDC10AQ9H1F0 79 aa17.79■□□□□ 0.44
RAPGEF1-203ENST00000372195 ODF3Q96PU9 254 aa17.79■□□□□ 0.44
RAPGEF1-203ENST00000372195 U3KQK5 164 aa17.79■□□□□ 0.44
RAPGEF1-203ENST00000372195 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
RAPGEF1-203ENST00000372195 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.79■□□□□ 0.44
RAPGEF1-203ENST00000372195 PRORYQ9H606 182 aa17.78■□□□□ 0.44
RAPGEF1-203ENST00000372195 A0A0J9YWU9 116 aa17.77■□□□□ 0.44
RAPGEF1-203ENST00000372195 INSL3P51460 131 aa17.77■□□□□ 0.44
RAPGEF1-203ENST00000372195 WFDC10BQ8IUB3 73 aa17.77■□□□□ 0.44
RAPGEF1-203ENST00000372195 C3orf22Q8N5N4 141 aa17.77■□□□□ 0.44
RAPGEF1-203ENST00000372195 Q6ZS46 218 aa17.76■□□□□ 0.43
RAPGEF1-203ENST00000372195 FAM236DA0A1B0GTK5 79 aa17.76■□□□□ 0.43
RAPGEF1-203ENST00000372195 FAM236CP0DP71 79 aa17.76■□□□□ 0.43
RAPGEF1-203ENST00000372195 DEFB131BA0A096LNP1 70 aa17.76■□□□□ 0.43
RAPGEF1-203ENST00000372195 MED12LQ86YW9 2145 aa17.76■□□□□ 0.43
RAPGEF1-203ENST00000372195 A0A087WZ39 114 aa17.75■□□□□ 0.43
RAPGEF1-203ENST00000372195 BBC3Q96PG8 261 aaPredicted RBP17.75■□□□□ 0.43
RAPGEF1-203ENST00000372195 TRBV6-8A0A0A6YYG3 113 aa17.75■□□□□ 0.43
RAPGEF1-203ENST00000372195 UQCRQO14949 82 aa17.75■□□□□ 0.43
RAPGEF1-203ENST00000372195 C11orf21Q9P2W6 132 aa17.74■□□□□ 0.43
RAPGEF1-203ENST00000372195 C2orf91Q6ZV80 131 aa17.74■□□□□ 0.43
RAPGEF1-203ENST00000372195 C3orf84H3BNL1 204 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms