RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
SS18L1-202ENST00000370848 UBE2WQ96B02 151 aa10.07□□□□□ -0.8
SS18L1-202ENST00000370848 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
SS18L1-202ENST00000370848 LRCOL1A6NCL2 159 aa10.06□□□□□ -0.8
SS18L1-202ENST00000370848 PSCAO43653 123 aa10.06□□□□□ -0.8
SS18L1-202ENST00000370848 CAMPP49913 170 aa10.06□□□□□ -0.8
SS18L1-202ENST00000370848 WFDC2Q14508 124 aa10.06□□□□□ -0.8
SS18L1-202ENST00000370848 KCNIP4Q6PIL6 250 aa10.06□□□□□ -0.8
SS18L1-202ENST00000370848 COMMD7Q86VX2 200 aa10.06□□□□□ -0.8
SS18L1-202ENST00000370848 SDHAF1A6NFY7 115 aa10.05□□□□□ -0.8
SS18L1-202ENST00000370848 RBX1P62877 108 aa10.05□□□□□ -0.8
SS18L1-202ENST00000370848 Q5VSD8 79 aa10.05□□□□□ -0.8
SS18L1-202ENST00000370848 NTN5Q8WTR8 489 aaPredicted RBP10.05□□□□□ -0.8
SS18L1-202ENST00000370848 FRZBQ92765 325 aa10.05□□□□□ -0.8
SS18L1-202ENST00000370848 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 TMEM218A2RU14 115 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
SS18L1-202ENST00000370848 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 AMTP48728 403 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 PNRC1Q12796 327 aaPredicted RBP10.04□□□□□ -0.8
SS18L1-202ENST00000370848 COTL1Q14019 142 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 UQCC3Q6UW78 93 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
SS18L1-202ENST00000370848 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
SS18L1-202ENST00000370848 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
SS18L1-202ENST00000370848 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
SS18L1-202ENST00000370848 GCSHP23434 173 aa10.03□□□□□ -0.8
SS18L1-202ENST00000370848 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
SS18L1-202ENST00000370848 FAM104BQ5XKR9 115 aa10.03□□□□□ -0.8
SS18L1-202ENST00000370848 MRAP2Q96G30 205 aa10.03□□□□□ -0.8
SS18L1-202ENST00000370848 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
SS18L1-202ENST00000370848 F8W036 122 aa10.02□□□□□ -0.81
SS18L1-202ENST00000370848 LECT2O14960 151 aa10.02□□□□□ -0.81
SS18L1-202ENST00000370848 PPP1R2P9O14990 202 aa10.02□□□□□ -0.81
SS18L1-202ENST00000370848 ELOBQ15370 118 aa10.02□□□□□ -0.81
SS18L1-202ENST00000370848 TM2D2Q9BX73 214 aa10.02□□□□□ -0.81
SS18L1-202ENST00000370848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
SS18L1-202ENST00000370848 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
SS18L1-202ENST00000370848 MT-ND4LP03901 98 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 PKIAP61925 76 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 HBBP68871 147 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 NRACQ8N912 160 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 TMEM242Q9NWH2 141 aa10.01□□□□□ -0.81
SS18L1-202ENST00000370848 LINC00862A6NCI5 91 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 TSHBP01222 138 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 CRPP02741 224 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 PMCHP20382 165 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 LINC00269Q8N2A0 174 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 BAALCQ8WXS3 180 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 ANAPC16Q96DE5 110 aa10□□□□□ -0.81
SS18L1-202ENST00000370848 A0A1B0GW15 77 aa9.99□□□□□ -0.81
SS18L1-202ENST00000370848 I3L3M4 83 aa9.99□□□□□ -0.81
SS18L1-202ENST00000370848 UBE2L6O14933 153 aa9.99□□□□□ -0.81
SS18L1-202ENST00000370848 APCSP02743 223 aa9.99□□□□□ -0.81
SS18L1-202ENST00000370848 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
SS18L1-202ENST00000370848 Q8N814 137 aa9.99□□□□□ -0.81
SS18L1-202ENST00000370848 RMI2Q96E14 147 aa9.99□□□□□ -0.81
SS18L1-202ENST00000370848 Q0VG73 95 aa9.98□□□□□ -0.81
SS18L1-202ENST00000370848 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
SS18L1-202ENST00000370848 FLG2Q5D862 2391 aaPredicted RBP9.98□□□□□ -0.81
SS18L1-202ENST00000370848 IGLV5-52A0A0A0MRZ9 124 aa9.97□□□□□ -0.81
SS18L1-202ENST00000370848 D6R8Y8 96 aa9.97□□□□□ -0.81
SS18L1-202ENST00000370848 Q6ZSA8 131 aa9.97□□□□□ -0.81
SS18L1-202ENST00000370848 C1orf43Q9BWL3 253 aa9.97□□□□□ -0.81
SS18L1-202ENST00000370848 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
SS18L1-202ENST00000370848 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 S100A8P05109 93 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 CKS2P33552 79 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 SUMO2P61956 95 aaKnown RBP9.96□□□□□ -0.82
SS18L1-202ENST00000370848 REG3AQ06141 175 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 ATP5L2Q7Z4Y8 100 aa9.96□□□□□ -0.82
SS18L1-202ENST00000370848 NPYP01303 97 aa9.95□□□□□ -0.82
SS18L1-202ENST00000370848 FGF6P10767 208 aa9.95□□□□□ -0.82
SS18L1-202ENST00000370848 ESDP10768 282 aa9.95□□□□□ -0.82
SS18L1-202ENST00000370848 MIAQ16674 131 aa9.95□□□□□ -0.82
SS18L1-202ENST00000370848 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
SS18L1-202ENST00000370848 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
SS18L1-202ENST00000370848 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.94□□□□□ -0.82
SS18L1-202ENST00000370848 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
SS18L1-202ENST00000370848 FAM229AH3BQW9 127 aa9.94□□□□□ -0.82
SS18L1-202ENST00000370848 TNFRSF6BO95407 300 aa9.94□□□□□ -0.82
SS18L1-202ENST00000370848 HLA-DQA1P01909 254 aa9.94□□□□□ -0.82
SS18L1-202ENST00000370848 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
SS18L1-202ENST00000370848 VCYO14598 125 aa9.93□□□□□ -0.82
SS18L1-202ENST00000370848 PPP1R17O96001 155 aa9.93□□□□□ -0.82
SS18L1-202ENST00000370848 SMR3BP02814 79 aaPredicted RBP9.93□□□□□ -0.82
SS18L1-202ENST00000370848 C10orf91Q5T1B1 145 aa9.93□□□□□ -0.82
SS18L1-202ENST00000370848 AMMECR1LQ6DCA0 310 aa9.93□□□□□ -0.82
SS18L1-202ENST00000370848 BTF3L4Q96K17 158 aa9.93□□□□□ -0.82
SS18L1-202ENST00000370848 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
SS18L1-202ENST00000370848 FAM30AQ9NZY2 134 aa9.92□□□□□ -0.82
SS18L1-202ENST00000370848 CARHSP1Q9Y2V2 147 aaKnown RBP9.92□□□□□ -0.82
SS18L1-202ENST00000370848 C7orf77A4D0Y5 90 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms