RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 UBE2WQ96B02 151 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 LGALS9O00182 355 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 LMO4P61968 165 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 APRG1Q8IVJ8 170 aa9.09□□□□□ -0.95
PHGDH-201ENST00000369407 IGHV3-16A0A0C4DH30 117 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 M0R2P5 195 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 NRGNQ92686 78 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 C19orf54Q5BKX5 351 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 LINC01587Q99440 93 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 ABCA2Q9BZC7 2435 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 H7C423 109 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 CD28P10747 220 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
PHGDH-201ENST00000369407 PIEZO1Q92508 2521 aa9.07□□□□□ -0.96
PHGDH-201ENST00000369407 NACAE9PAV3 2078 aa9.07□□□□□ -0.96
PHGDH-201ENST00000369407 TRBV10-2A0A0K0K1G8 114 aa9.07□□□□□ -0.96
PHGDH-201ENST00000369407 A0A0U1RRA0 63 aa9.07□□□□□ -0.96
PHGDH-201ENST00000369407 FBXL19-AS1Q494R0 122 aa9.07□□□□□ -0.96
PHGDH-201ENST00000369407 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-201ENST00000369407 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
PHGDH-201ENST00000369407 LITAFQ99732 161 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 TMEM126AQ9H061 195 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 DAZ1Q9NQZ3 744 aaKnown RBP9.06□□□□□ -0.96
PHGDH-201ENST00000369407 H3BUX3 64 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 C10orf99Q6UWK7 81 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 IGHV1-69P01742 117 aa9.06□□□□□ -0.96
PHGDH-201ENST00000369407 I3L3M4 83 aa9.05□□□□□ -0.96
PHGDH-201ENST00000369407 NSUN5P1Q3KNT7 163 aa9.05□□□□□ -0.96
PHGDH-201ENST00000369407 DCANP1Q8TF63 244 aa9.05□□□□□ -0.96
PHGDH-201ENST00000369407 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
PHGDH-201ENST00000369407 NDUFA12Q9UI09 145 aa9.05□□□□□ -0.96
PHGDH-201ENST00000369407 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
PHGDH-201ENST00000369407 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
PHGDH-201ENST00000369407 TRBV30A0A0K0K1B3 111 aa9.04□□□□□ -0.96
PHGDH-201ENST00000369407 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
PHGDH-201ENST00000369407 FAM208BQ5VWN6 2430 aa9.04□□□□□ -0.96
PHGDH-201ENST00000369407 RHOHQ15669 191 aa9.04□□□□□ -0.96
PHGDH-201ENST00000369407 ZNF625Q96I27 306 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-201ENST00000369407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-201ENST00000369407 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
PHGDH-201ENST00000369407 IGKV2-29A2NJV5 120 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-201ENST00000369407 K7ENP7 123 aa9.03□□□□□ -0.96
PHGDH-201ENST00000369407 NDUFA7O95182 113 aa9.03□□□□□ -0.96
PHGDH-201ENST00000369407 MYO18BQ8IUG5 2567 aa9.03□□□□□ -0.96
PHGDH-201ENST00000369407 KLRB1Q12918 225 aa9.03□□□□□ -0.96
PHGDH-201ENST00000369407 IGHV1OR15-1A0A075B7D0 117 aa9.02□□□□□ -0.96
PHGDH-201ENST00000369407 RPL13AP40429 203 aaKnown RBP9.02□□□□□ -0.96
PHGDH-201ENST00000369407 TMEM101Q96IK0 257 aa9.02□□□□□ -0.96
PHGDH-201ENST00000369407 HRCT1Q6UXD1 115 aa9.02□□□□□ -0.97
PHGDH-201ENST00000369407 POLQO75417 2590 aa9.02□□□□□ -0.97
PHGDH-201ENST00000369407 ACACBO00763 2458 aa9.02□□□□□ -0.97
PHGDH-201ENST00000369407 hADV29S1A0JD25 119 aa9.02□□□□□ -0.97
PHGDH-201ENST00000369407 J3KT08 172 aa9.02□□□□□ -0.97
PHGDH-201ENST00000369407 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.97
PHGDH-201ENST00000369407 USMG5Q96IX5 58 aa9.01□□□□□ -0.97
PHGDH-201ENST00000369407 USP9YO00507 2555 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-201ENST00000369407 TRAV25A0A0B4J276 109 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 COX6CP09669 75 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 A0A0J9YX75 114 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 Q6Q795 121 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 Q6ZSN1 163 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 KIR2DL5BQ8NHK3 375 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
PHGDH-201ENST00000369407 F5H768 121 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 IGHG2P01859 326 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
PHGDH-201ENST00000369407 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 RBMY1FQ15415 496 aaKnown RBP9□□□□□ -0.97
PHGDH-201ENST00000369407 OR13C6PQ8NH95 151 aa9□□□□□ -0.97
PHGDH-201ENST00000369407 MIAQ16674 131 aa8.99□□□□□ -0.97
PHGDH-201ENST00000369407 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
PHGDH-201ENST00000369407 DSCR8Q96T75 97 aa8.99□□□□□ -0.97
PHGDH-201ENST00000369407 FLNCQ14315 2725 aa8.99□□□□□ -0.97
PHGDH-201ENST00000369407 PKD1L2Q7Z442 2459 aa8.99□□□□□ -0.97
PHGDH-201ENST00000369407 VSIG2Q96IQ7 327 aa8.99□□□□□ -0.97
PHGDH-201ENST00000369407 IGHV4-61A0A0C4DH41 118 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 MRPS36P82909 103 aaKnown RBP8.98□□□□□ -0.97
PHGDH-201ENST00000369407 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 C3orf22Q8N5N4 141 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 LST1O00453 97 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 NBL1P41271 181 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 SYNJ2BPP57105 145 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
PHGDH-201ENST00000369407 ITPR1Q14643 2758 aa8.97□□□□□ -0.97
PHGDH-201ENST00000369407 SNRPD3P62318 126 aaKnown RBP8.97□□□□□ -0.97
PHGDH-201ENST00000369407 ZANQ9Y493 2812 aa8.97□□□□□ -0.97
PHGDH-201ENST00000369407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-201ENST00000369407 LINC00467Q9BRT7 94 aa8.97□□□□□ -0.97
PHGDH-201ENST00000369407 RNF152Q8N8N0 203 aa8.96□□□□□ -0.97
PHGDH-201ENST00000369407 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.98
PHGDH-201ENST00000369407 LY6DQ14210 128 aa8.96□□□□□ -0.98
PHGDH-201ENST00000369407 H3BT86 120 aa8.96□□□□□ -0.98
PHGDH-201ENST00000369407 C19orf84I3L1E1 186 aa8.96□□□□□ -0.98
PHGDH-201ENST00000369407 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms