RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PRM2P04554 102 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 NRACQ8N912 160 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 C4orf3Q8WVX3 66 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 CITED1Q99966 193 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 ZFAND2AQ8N6M9 145 aa7.9□□□□□ -1.14
TPM3-212ENST00000368533 SCGB1C2P0DMR2 95 aa7.9□□□□□ -1.14
TPM3-212ENST00000368533 KRTAP10-3P60369 221 aa7.9□□□□□ -1.14
TPM3-212ENST00000368533 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
TPM3-212ENST00000368533 TNFRSF18Q9Y5U5 241 aa7.9□□□□□ -1.14
TPM3-212ENST00000368533 A0A087WX48 190 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 TMEM89A2RUT3 159 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 SNCGO76070 127 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 DEFB131AP59861 70 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 ATP6V0E2Q8NHE4 81 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 FBN1P35555 2871 aaKnown RBP7.89□□□□□ -1.15
TPM3-212ENST00000368533 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 A8MWV9 139 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 K7EMT4 169 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 RHODO00212 210 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 EMP1P54849 157 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 TRPT1Q86TN4 253 aaKnown RBP7.89□□□□□ -1.15
TPM3-212ENST00000368533 RNF152Q8N8N0 203 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 DPH3P1Q9H4G8 78 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 IGLV2-18A0A075B6J9 118 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 MYMXA0A1B0GTQ4 84 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 M0QXV9 152 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 SUMO2P61956 95 aaKnown RBP7.89□□□□□ -1.15
TPM3-212ENST00000368533 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
TPM3-212ENST00000368533 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
TPM3-212ENST00000368533 IFITM1P13164 125 aa7.88□□□□□ -1.15
TPM3-212ENST00000368533 LENEPQ9Y5L5 61 aa7.88□□□□□ -1.15
TPM3-212ENST00000368533 NACAE9PAV3 2078 aa7.88□□□□□ -1.15
TPM3-212ENST00000368533 C9JAW5 83 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 FAM74A4Q5TZK3 123 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 A0A087WWL8 130 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 ZNF815PA8K554 130 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 CD7P09564 240 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 SNRPD3P62318 126 aaKnown RBP7.87□□□□□ -1.15
TPM3-212ENST00000368533 TAL2Q16559 108 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 RASL10AQ92737 203 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 ORMDL2Q53FV1 153 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 JPT2Q9H910 190 aa7.87□□□□□ -1.15
TPM3-212ENST00000368533 COL6A5A8TX70 2615 aa7.86□□□□□ -1.15
TPM3-212ENST00000368533 K7EQG2 157 aa7.86□□□□□ -1.15
TPM3-212ENST00000368533 C2orf66Q6UXQ4 117 aa7.86□□□□□ -1.15
TPM3-212ENST00000368533 PRADC1Q9BSG0 188 aa7.86□□□□□ -1.15
TPM3-212ENST00000368533 CHCHD5Q9BSY4 110 aa7.86□□□□□ -1.15
TPM3-212ENST00000368533 PEMTQ9UBM1 199 aa7.86□□□□□ -1.15
TPM3-212ENST00000368533 IGHV4-4A0A075B6R2 117 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 LINC01546A6NGU7 62 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 H7C1H1 209 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 LGALS9O00182 355 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 PROK1P58294 105 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.85□□□□□ -1.15
TPM3-212ENST00000368533 NTN5Q8WTR8 489 aaPredicted RBP7.85□□□□□ -1.15
TPM3-212ENST00000368533 UBE2D3P61077 147 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 UBE2D2P62837 147 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 TEX49A0A1B0GTD5 131 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 SLC25A20O43772 301 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 PLNP26678 52 aa7.85□□□□□ -1.15
TPM3-212ENST00000368533 IGHV3OR16-12A0A075B7B8 117 aa7.84□□□□□ -1.15
TPM3-212ENST00000368533 LOC107984640A0A0U1RRK4 108 aa7.84□□□□□ -1.15
TPM3-212ENST00000368533 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
TPM3-212ENST00000368533 DEFB114Q30KQ6 69 aa7.84□□□□□ -1.15
TPM3-212ENST00000368533 C15orf53Q8NAA6 179 aa7.84□□□□□ -1.15
TPM3-212ENST00000368533 F8VRH5 84 aa7.84□□□□□ -1.15
TPM3-212ENST00000368533 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
TPM3-212ENST00000368533 NDUFA11Q86Y39 141 aa7.84□□□□□ -1.15
TPM3-212ENST00000368533 PF4P02776 101 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 PKD1L1Q8TDX9 2849 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 A0A0J9YX75 114 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 ADARB2-AS1A8MUL3 147 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 UBE2D1P51668 147 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 ZNF256Q9Y2P7 627 aaPredicted RBP7.83□□□□□ -1.16
TPM3-212ENST00000368533 MUC4Q99102 2169 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 TMEM262E9PQX1 116 aa7.83□□□□□ -1.16
TPM3-212ENST00000368533 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
TPM3-212ENST00000368533 CFC1P0CG37 223 aa7.82□□□□□ -1.16
TPM3-212ENST00000368533 ZNF56Q15929 161 aa7.82□□□□□ -1.16
TPM3-212ENST00000368533 Q8N1Y9 231 aa7.82□□□□□ -1.16
TPM3-212ENST00000368533 TOMM6Q96B49 74 aa7.82□□□□□ -1.16
TPM3-212ENST00000368533 C16orf95Q9H693 158 aa7.82□□□□□ -1.16
TPM3-212ENST00000368533 DUSP14O95147 198 aaKnown RBP7.82□□□□□ -1.16
TPM3-212ENST00000368533 RBMY1BA6NDE4 496 aaKnown RBP7.81□□□□□ -1.16
TPM3-212ENST00000368533 RBMY1EA6NEQ0 496 aaKnown RBP7.81□□□□□ -1.16
TPM3-212ENST00000368533 RBMY1DP0C7P1 496 aaKnown RBP7.81□□□□□ -1.16
TPM3-212ENST00000368533 ODF3Q96PU9 254 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 MAP6D1Q9H9H5 199 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 BAALCQ8WXS3 180 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 XCL2Q9UBD3 114 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 PPP1R17O96001 155 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 RBMY1A1P0DJD3 496 aaKnown RBP7.81□□□□□ -1.16
TPM3-212ENST00000368533 RBMY1CP0DJD4 496 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms