RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 CCL25O15444 150 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 FHL3Q13643 280 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 C1orf158Q8N1D5 194 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 GAGE12JA6NER3 117 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 DEFB130BP0DP73 79 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 DEFB130AP0DP74 79 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 PCP4P48539 62 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 GAGE1Q13065 139 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 GAGE4Q13068 117 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 GAGE5Q13069 117 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 UBE2V1Q13404 147 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
SHC1-202ENST00000368445 TSHBP01222 138 aa10.04□□□□□ -0.8
SHC1-202ENST00000368445 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
SHC1-202ENST00000368445 IGIPA6NJ69 53 aa10.04□□□□□ -0.8
SHC1-202ENST00000368445 LGALS3P17931 250 aaKnown RBP10.04□□□□□ -0.8
SHC1-202ENST00000368445 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
SHC1-202ENST00000368445 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
SHC1-202ENST00000368445 RHODO00212 210 aa10.03□□□□□ -0.8
SHC1-202ENST00000368445 SIVA1O15304 175 aa10.03□□□□□ -0.8
SHC1-202ENST00000368445 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 TMEM238LA0A1B0GVL6 79 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 ADARB2-AS1A8MUL3 147 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 RHOHQ15669 191 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 PAPPA-AS1Q5QFB9 102 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 VWFP04275 2813 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 MAST4O15021 2626 aa10.02□□□□□ -0.81
SHC1-202ENST00000368445 APOMO95445 188 aa10.01□□□□□ -0.81
SHC1-202ENST00000368445 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
SHC1-202ENST00000368445 LINC01549A6NIU2 74 aa10.01□□□□□ -0.81
SHC1-202ENST00000368445 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
SHC1-202ENST00000368445 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
SHC1-202ENST00000368445 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
SHC1-202ENST00000368445 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
SHC1-202ENST00000368445 PRSS2P07478 247 aa10□□□□□ -0.81
SHC1-202ENST00000368445 RNF151Q2KHN1 245 aa10□□□□□ -0.81
SHC1-202ENST00000368445 POM121L12Q8N7R1 296 aa10□□□□□ -0.81
SHC1-202ENST00000368445 CMC4P56277 68 aaPredicted RBP10□□□□□ -0.81
SHC1-202ENST00000368445 CEND1Q8N111 149 aa10□□□□□ -0.81
SHC1-202ENST00000368445 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
SHC1-202ENST00000368445 TENM1Q9UKZ4 2725 aa9.99□□□□□ -0.81
SHC1-202ENST00000368445 E9PLD3 99 aa9.99□□□□□ -0.81
SHC1-202ENST00000368445 FABP2P12104 132 aa9.99□□□□□ -0.81
SHC1-202ENST00000368445 RPL32P62910 135 aaKnown RBP9.99□□□□□ -0.81
SHC1-202ENST00000368445 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
SHC1-202ENST00000368445 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
SHC1-202ENST00000368445 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 GTF2H5Q6ZYL4 71 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
SHC1-202ENST00000368445 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 H3BRM9 83 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 DEFB4AO15263 64 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 LINC00467Q9BRT7 94 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 IGLV4-69A0A075B6H9 119 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 C9orf118A6NHY6 69 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 H7C2G1 150 aa9.98□□□□□ -0.81
SHC1-202ENST00000368445 J3QQQ9 107 aa9.97□□□□□ -0.81
SHC1-202ENST00000368445 UBE2L6O14933 153 aa9.97□□□□□ -0.81
SHC1-202ENST00000368445 KRTAP10-3P60369 221 aa9.97□□□□□ -0.81
SHC1-202ENST00000368445 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
SHC1-202ENST00000368445 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 A0A0U1RRA0 63 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 CRLF1O75462 422 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 HIGD1BQ9P298 99 aa9.96□□□□□ -0.81
SHC1-202ENST00000368445 LOC107984156A0A0G2JMH3 177 aa9.96□□□□□ -0.82
SHC1-202ENST00000368445 ARL17AQ8IVW1 177 aa9.96□□□□□ -0.82
SHC1-202ENST00000368445 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.82
SHC1-202ENST00000368445 NDUFA7O95182 113 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 NPC2P61916 151 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 Q6ZUT4 128 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 LOC100131303A0A0U1RQF7 123 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 RS1O15537 224 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 A0A096LPF7 62 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 A8MTW9 85 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 SPINK8P0C7L1 97 aa9.95□□□□□ -0.82
SHC1-202ENST00000368445 A8MZ25 164 aa9.94□□□□□ -0.82
SHC1-202ENST00000368445 K7EQD1 137 aa9.94□□□□□ -0.82
SHC1-202ENST00000368445 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
SHC1-202ENST00000368445 C12orf74Q32Q52 190 aa9.94□□□□□ -0.82
SHC1-202ENST00000368445 MTURNQ8N3F0 131 aa9.93□□□□□ -0.82
SHC1-202ENST00000368445 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
SHC1-202ENST00000368445 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
SHC1-202ENST00000368445 HTN3P15516 51 aa9.93□□□□□ -0.82
SHC1-202ENST00000368445 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
SHC1-202ENST00000368445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.93□□□□□ -0.82
SHC1-202ENST00000368445 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
SHC1-202ENST00000368445 CHCHD5Q9BSY4 110 aa9.92□□□□□ -0.82
SHC1-202ENST00000368445 A6NJY4 79 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms