RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 A0A1B0GUT8 65 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 LRCOL1A6NCL2 159 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 HIGD1CA8MV81 97 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 IQCJQ1A5X6 159 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 GATD1Q8NB37 220 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
CD48-202ENST00000368046 IGHV1-24A0A0C4DH33 117 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 Q0VG73 95 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 ADIRFQ15847 76 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 ATRAIDQ6UW56 229 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 UBE2WQ96B02 151 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 RMI2Q96E14 147 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
CD48-202ENST00000368046 HERC2O95714 4834 aa6.55□□□□□ -1.36
CD48-202ENST00000368046 CDK2AP2O75956 126 aa6.55□□□□□ -1.36
CD48-202ENST00000368046 RIGQ13278 110 aa6.55□□□□□ -1.36
CD48-202ENST00000368046 MPV17L2Q567V2 206 aa6.55□□□□□ -1.36
CD48-202ENST00000368046 NUP35Q8NFH5 326 aa6.55□□□□□ -1.36
CD48-202ENST00000368046 NAT8BQ9UHF3 227 aa6.55□□□□□ -1.36
CD48-202ENST00000368046 IGKV2D-24A0A075B6R9 120 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 SMIM27A0A1W2PRY6 76 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 ANGP03950 147 aaKnown RBP6.54□□□□□ -1.36
CD48-202ENST00000368046 RBX1P62877 108 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 GAGE6Q13070 117 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 COTL1Q14019 142 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 ENHOQ6UWT2 76 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 MAPKAPK5-AS1Q8N8E1 139 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 Q8N976 141 aa6.54□□□□□ -1.36
CD48-202ENST00000368046 TRBV6-5A0A0K0K1A5 114 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 A0A1B0GUV1 79 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 RAB4AP20338 218 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 CLLU1Q5K131 121 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 Q8N814 137 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
CD48-202ENST00000368046 TMEM243Q9BU79 118 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 LRP1BQ9NZR2 4599 aa6.53□□□□□ -1.36
CD48-202ENST00000368046 SDHAF1A6NFY7 115 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 NCR2O95944 276 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 CRPP02741 224 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 GCSHP23434 173 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 FUSP35637 526 aaKnown RBP eCLIP6.52□□□□□ -1.37
CD48-202ENST00000368046 MIAQ16674 131 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 LINC00269Q8N2A0 174 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 DEFB104AQ8WTQ1 72 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 BAALCQ8WXS3 180 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 RPL39LQ96EH5 51 aaKnown RBP6.52□□□□□ -1.37
CD48-202ENST00000368046 RNF185Q96GF1 192 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 PRR34Q9NV39 138 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
CD48-202ENST00000368046 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 A0A1B0GW15 77 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 I3L3M4 83 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 UBE2L6O14933 153 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 PMCHP20382 165 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 AMTP48728 403 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 IFITM2Q01629 132 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 AMN1Q8IY45 258 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 ST20Q9HBF5 79 aa6.51□□□□□ -1.37
CD48-202ENST00000368046 LINC00862A6NCI5 91 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 H7C423 109 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 PPP1R2P9O14990 202 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 GAS8-AS1O95177 125 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 PPP1R17O96001 155 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 POLR2KP53803 58 aaKnown RBP6.5□□□□□ -1.37
CD48-202ENST00000368046 PNRC1Q12796 327 aaPredicted RBP6.5□□□□□ -1.37
CD48-202ENST00000368046 WFDC2Q14508 124 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 FAM104BQ5XKR9 115 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
CD48-202ENST00000368046 RYR1P21817 5038 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 IGLV4-60A0A075B6I1 120 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 TRAV8-4A0A0B4J246 113 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 VCYO14598 125 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 LECT2O14960 151 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 CAMPP49913 170 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 REG3AQ06141 175 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 TMEM70Q9BUB7 260 aa6.49□□□□□ -1.37
CD48-202ENST00000368046 TRBV27A0A0K0K1C4 114 aa6.48□□□□□ -1.37
CD48-202ENST00000368046 APCSP02743 223 aa6.48□□□□□ -1.37
CD48-202ENST00000368046 MT-ND4LP03901 98 aa6.48□□□□□ -1.37
CD48-202ENST00000368046 S100A8P05109 93 aa6.48□□□□□ -1.37
CD48-202ENST00000368046 MRPL51Q4U2R6 128 aaKnown RBP6.48□□□□□ -1.37
CD48-202ENST00000368046 ANAPC16Q96DE5 110 aa6.48□□□□□ -1.37
CD48-202ENST00000368046 F8W036 122 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 SMKR1H3BMG3 65 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 ESDP10768 282 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 RPS10P46783 165 aaKnown RBP6.47□□□□□ -1.37
CD48-202ENST00000368046 XGP55808 180 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 C14orf177Q52M58 125 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 AMMECR1LQ6DCA0 310 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 UQCC3Q6UW78 93 aa6.47□□□□□ -1.37
CD48-202ENST00000368046 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.46□□□□□ -1.38
CD48-202ENST00000368046 TRBV24-1A0A075B6N3 115 aa6.46□□□□□ -1.38
CD48-202ENST00000368046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.46□□□□□ -1.38
CD48-202ENST00000368046 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms