RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TRGV11A0A075B6L2 103 aa8.8□□□□□ -1
USF1-203ENST00000368021 IGHV3-16A0A0C4DH30 117 aa8.8□□□□□ -1
USF1-203ENST00000368021 NXPH4O95158 308 aa8.8□□□□□ -1
USF1-203ENST00000368021 IFITM1P13164 125 aa8.8□□□□□ -1
USF1-203ENST00000368021 KRTAP10-11P60412 298 aa8.8□□□□□ -1
USF1-203ENST00000368021 MORN3Q6PF18 240 aaPredicted RBP8.8□□□□□ -1
USF1-203ENST00000368021 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
USF1-203ENST00000368021 PRO0461Q9UI25 63 aa8.8□□□□□ -1
USF1-203ENST00000368021 TRBV20-1A0A075B6N2 111 aa8.8□□□□□ -1
USF1-203ENST00000368021 FAM104BQ5XKR9 115 aa8.8□□□□□ -1
USF1-203ENST00000368021 C9orf85Q96MD7 179 aa8.8□□□□□ -1
USF1-203ENST00000368021 SNCGO76070 127 aa8.79□□□□□ -1
USF1-203ENST00000368021 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
USF1-203ENST00000368021 RRN3P1Q2M238 152 aa8.79□□□□□ -1
USF1-203ENST00000368021 TEN1Q86WV5 123 aa8.79□□□□□ -1
USF1-203ENST00000368021 MUC4Q99102 2169 aa8.79□□□□□ -1
USF1-203ENST00000368021 XCL2Q9UBD3 114 aa8.79□□□□□ -1
USF1-203ENST00000368021 A0A087WX48 190 aa8.78□□□□□ -1
USF1-203ENST00000368021 GIG44P09565 113 aaPredicted RBP8.78□□□□□ -1
USF1-203ENST00000368021 KPRPQ5T749 579 aaPredicted RBP8.78□□□□□ -1
USF1-203ENST00000368021 DNAJC30Q96LL9 226 aa8.78□□□□□ -1
USF1-203ENST00000368021 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
USF1-203ENST00000368021 TIMM8BQ9Y5J9 83 aaPredicted RBP8.78□□□□□ -1
USF1-203ENST00000368021 TGP01266 2768 aa8.78□□□□□ -1
USF1-203ENST00000368021 AMN1Q8IY45 258 aa8.77□□□□□ -1
USF1-203ENST00000368021 PRELID3AQ96N28 172 aa8.77□□□□□ -1
USF1-203ENST00000368021 LINC01587Q99440 93 aa8.77□□□□□ -1
USF1-203ENST00000368021 MDFICQ9P1T7 246 aa8.77□□□□□ -1
USF1-203ENST00000368021 M0R381 172 aa8.77□□□□□ -1.01
USF1-203ENST00000368021 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
USF1-203ENST00000368021 C1orf158Q8N1D5 194 aa8.77□□□□□ -1.01
USF1-203ENST00000368021 U3KQK5 164 aa8.77□□□□□ -1.01
USF1-203ENST00000368021 HBDP02042 147 aa8.76□□□□□ -1.01
USF1-203ENST00000368021 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
USF1-203ENST00000368021 EGFEM1PQ0D2K5 195 aa8.76□□□□□ -1.01
USF1-203ENST00000368021 PRSS3P2Q8NHM4 247 aa8.76□□□□□ -1.01
USF1-203ENST00000368021 RNF185Q96GF1 192 aa8.76□□□□□ -1.01
USF1-203ENST00000368021 A0A1B0GX51 115 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 MT-ATP8P03928 68 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 XGP55808 180 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 ZNF415Q09FC8 603 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 MRPL51Q4U2R6 128 aaKnown RBP8.75□□□□□ -1.01
USF1-203ENST00000368021 PIK3CD-AS1Q5SR53 167 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 ORMDL3Q8N138 153 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 C20orf78Q9BR46 151 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 ATP5LO75964 103 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 HTN1P15515 57 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 DEFB121Q5J5C9 76 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 DPH3P1Q9H4G8 78 aa8.75□□□□□ -1.01
USF1-203ENST00000368021 D6R8Y8 96 aa8.74□□□□□ -1.01
USF1-203ENST00000368021 SPRY2O43597 315 aa8.74□□□□□ -1.01
USF1-203ENST00000368021 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
USF1-203ENST00000368021 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
USF1-203ENST00000368021 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
USF1-203ENST00000368021 NHP2Q9NX24 153 aaKnown RBP8.74□□□□□ -1.01
USF1-203ENST00000368021 ATP5G1P05496 136 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 CKS2P33552 79 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
USF1-203ENST00000368021 C12orf74Q32Q52 190 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 KIR2DL5BQ8NHK3 375 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 MRAPQ8TCY5 172 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 A8MWV9 139 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 K7EIL1 84 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 M0R2P5 195 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 NMUP48645 174 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 LINC00173Q6ZV60 143 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 TMEM263Q8WUH6 116 aaKnown RBP8.73□□□□□ -1.01
USF1-203ENST00000368021 IFI27L1Q96BM0 104 aa8.73□□□□□ -1.01
USF1-203ENST00000368021 IGHV3OR16-12A0A075B7B8 117 aa8.72□□□□□ -1.01
USF1-203ENST00000368021 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
USF1-203ENST00000368021 FXYD2P54710 66 aa8.72□□□□□ -1.01
USF1-203ENST00000368021 ZNF876PQ49A33 203 aa8.72□□□□□ -1.01
USF1-203ENST00000368021 C14orf178Q8N769 122 aaPredicted RBP8.72□□□□□ -1.01
USF1-203ENST00000368021 ZMAT4Q9H898 229 aa8.72□□□□□ -1.01
USF1-203ENST00000368021 KIF25-AS1Q9Y6Z4 181 aa8.72□□□□□ -1.01
USF1-203ENST00000368021 PRM2P04554 102 aa8.71□□□□□ -1.01
USF1-203ENST00000368021 IL17DQ8TAD2 202 aa8.71□□□□□ -1.01
USF1-203ENST00000368021 LINC01600Q96MT4 127 aa8.71□□□□□ -1.01
USF1-203ENST00000368021 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.01
USF1-203ENST00000368021 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.01
USF1-203ENST00000368021 J3KT08 172 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
USF1-203ENST00000368021 APOC4P55056 127 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 LINC00315P59091 139 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 TP73-AS1Q9UF72 201 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 C16orf74Q96GX8 76 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
USF1-203ENST00000368021 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 TRBV25-1A0A075B6N4 114 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 SMKR1H3BMG3 65 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 NCR2O95944 276 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 CRYGDP07320 174 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 RASL10AQ92737 203 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 JPT2Q9H910 190 aa8.69□□□□□ -1.02
USF1-203ENST00000368021 LINC01546A6NGU7 62 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 TNFRSF6BO95407 300 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms