RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 I3L3M4 83 aa8.22□□□□□ -1.09
NECTIN4-201ENST00000368012 M0R2P5 195 aa8.22□□□□□ -1.09
NECTIN4-201ENST00000368012 UCNP55089 124 aa8.22□□□□□ -1.09
NECTIN4-201ENST00000368012 DEFB112Q30KQ8 113 aa8.22□□□□□ -1.09
NECTIN4-201ENST00000368012 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
NECTIN4-201ENST00000368012 Q9UF83 564 aa8.22□□□□□ -1.09
NECTIN4-201ENST00000368012 CFHR3Q02985 330 aa8.21□□□□□ -1.09
NECTIN4-201ENST00000368012 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.1
NECTIN4-201ENST00000368012 MSMBP08118 114 aa8.21□□□□□ -1.1
NECTIN4-201ENST00000368012 U3KQE9 123 aa8.21□□□□□ -1.1
NECTIN4-201ENST00000368012 AVPP01185 164 aa8.21□□□□□ -1.1
NECTIN4-201ENST00000368012 RPL13AP40429 203 aaKnown RBP8.21□□□□□ -1.1
NECTIN4-201ENST00000368012 IGIPA6NJ69 53 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 RS1O15537 224 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHV4-4A0A075B6R2 117 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 SLURP1P55000 103 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 RHODO00212 210 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHV3-30-3P0DP02 117 aa8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 POLR2KP53803 58 aaKnown RBP8.2□□□□□ -1.1
NECTIN4-201ENST00000368012 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 ELANEP08246 267 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 GAGE5Q13069 117 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 GAGE6Q13070 117 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 HELZ2Q9BYK8 2649 aaKnown RBP8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 CELSR2Q9HCU4 2923 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHG2P01859 326 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 ZNF22P17026 224 aaPredicted RBP8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 HERV-K104P63124 156 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHV4OR15-8A0A075B7B6 117 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 A0A087WW49 117 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 M0QY20 66 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 UBE2D1P51668 147 aa8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 C11orf68Q9H3H3 251 aaKnown RBP8.19□□□□□ -1.1
NECTIN4-201ENST00000368012 C20orf203Q8NBC4 194 aa8.18□□□□□ -1.1
NECTIN4-201ENST00000368012 TRGV1A0A0A0MS02 117 aa8.18□□□□□ -1.1
NECTIN4-201ENST00000368012 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
NECTIN4-201ENST00000368012 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
NECTIN4-201ENST00000368012 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 TMEM262E9PQX1 116 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 C18orf65Q6ZTR6 163 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 A0A0J9YX75 114 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 A0A0J9YXY3 114 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 LEPROTO15243 131 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 DOPEY1Q5JWR5 2465 aa8.17□□□□□ -1.1
NECTIN4-201ENST00000368012 RNF223E7ERA6 249 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 TRGV11A0A075B6L2 103 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 COX6B1P14854 86 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 LINC00315P59091 139 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 H3BMM0 161 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 SOCS3O14543 225 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 TRIAP1O43715 76 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 DCANP1Q8TF63 244 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 UBE2WQ96B02 151 aa8.16□□□□□ -1.1
NECTIN4-201ENST00000368012 B4DSR2 109 aa8.15□□□□□ -1.1
NECTIN4-201ENST00000368012 NDUFA7O95182 113 aa8.15□□□□□ -1.1
NECTIN4-201ENST00000368012 RNASE1P07998 156 aaKnown RBP8.15□□□□□ -1.1
NECTIN4-201ENST00000368012 TMEM223A0PJW6 202 aa8.15□□□□□ -1.11
NECTIN4-201ENST00000368012 A6NDX4 124 aa8.15□□□□□ -1.11
NECTIN4-201ENST00000368012 GAGE12JA6NER3 117 aa8.15□□□□□ -1.11
NECTIN4-201ENST00000368012 GAGE4Q13068 117 aa8.15□□□□□ -1.11
NECTIN4-201ENST00000368012 PRIMA1Q86XR5 153 aa8.15□□□□□ -1.11
NECTIN4-201ENST00000368012 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.11
NECTIN4-201ENST00000368012 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 KLLNB2CW77 178 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 OR13C6PQ8NH95 151 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 CITED1Q99966 193 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 PRB1P04280 392 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 NDUFV3P56181 108 aaKnown RBP8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 Q9H8V8 135 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 FBN2P35556 2912 aa8.14□□□□□ -1.11
NECTIN4-201ENST00000368012 GAGE7O76087 117 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 UBE2D3P61077 147 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 UBE2D2P62837 147 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 IFITM1P13164 125 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 C10orf105Q8TEF2 133 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 ICOSQ9Y6W8 199 aa8.13□□□□□ -1.11
NECTIN4-201ENST00000368012 C19orf54Q5BKX5 351 aa8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 TEX15Q9BXT5 2789 aa8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 UBE2L6O14933 153 aa8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 NHLRC4P0CG21 123 aaPredicted RBP8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 TMEM61Q8N0U2 210 aa8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
NECTIN4-201ENST00000368012 RHOHQ15669 191 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms