RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
VAMP4-202ENST00000367740 M0QY20 66 aa8.66□□□□□ -1.02
VAMP4-202ENST00000367740 PEX7O00628 323 aa8.66□□□□□ -1.02
VAMP4-202ENST00000367740 BCL2P10415 239 aa8.66□□□□□ -1.02
VAMP4-202ENST00000367740 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
VAMP4-202ENST00000367740 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
VAMP4-202ENST00000367740 WFDC1Q9HC57 220 aa8.66□□□□□ -1.02
VAMP4-202ENST00000367740 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
VAMP4-202ENST00000367740 IGHV1-58A0A0C4DH39 117 aa8.65□□□□□ -1.02
VAMP4-202ENST00000367740 PLA2G10O15496 165 aa8.65□□□□□ -1.02
VAMP4-202ENST00000367740 SNAI2O43623 268 aa8.65□□□□□ -1.02
VAMP4-202ENST00000367740 IL7P13232 177 aa8.65□□□□□ -1.02
VAMP4-202ENST00000367740 NKX2-5P52952 324 aaPredicted RBP8.65□□□□□ -1.02
VAMP4-202ENST00000367740 ZFP30Q9Y2G7 519 aa8.65□□□□□ -1.02
VAMP4-202ENST00000367740 A0A1W2PRE2 83 aa8.64□□□□□ -1.03
VAMP4-202ENST00000367740 SPANXN1Q5VSR9 72 aa8.64□□□□□ -1.03
VAMP4-202ENST00000367740 MED28Q9H204 178 aa8.64□□□□□ -1.03
VAMP4-202ENST00000367740 CDIP1Q9H305 208 aa8.64□□□□□ -1.03
VAMP4-202ENST00000367740 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 A0A087WZ39 114 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 LYRM1O43325 122 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 SMIM17P0DL12 118 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 FGF6P10767 208 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 SUMO4Q6EEV6 95 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
VAMP4-202ENST00000367740 CARHSP1Q9Y2V2 147 aaKnown RBP8.63□□□□□ -1.03
VAMP4-202ENST00000367740 KRTAP9-7A8MTY7 169 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 CXorf1O96002 111 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 CXCL1P09341 107 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 OR5AL1P0C617 328 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 XCL1P47992 114 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 CAMPP49913 170 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 SSTP61278 116 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
VAMP4-202ENST00000367740 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
VAMP4-202ENST00000367740 MGPP08493 103 aa8.61□□□□□ -1.03
VAMP4-202ENST00000367740 FMC1Q96HJ9 113 aa8.61□□□□□ -1.03
VAMP4-202ENST00000367740 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
VAMP4-202ENST00000367740 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
VAMP4-202ENST00000367740 LTAP01374 205 aa8.6□□□□□ -1.03
VAMP4-202ENST00000367740 UBE2G2P60604 165 aa8.6□□□□□ -1.03
VAMP4-202ENST00000367740 MEF2BQ02080 365 aaPredicted RBP8.6□□□□□ -1.03
VAMP4-202ENST00000367740 NUP35Q8NFH5 326 aa8.6□□□□□ -1.03
VAMP4-202ENST00000367740 HIST1H2BAQ96A08 127 aa8.6□□□□□ -1.03
VAMP4-202ENST00000367740 MLST8Q9BVC4 326 aa8.6□□□□□ -1.03
VAMP4-202ENST00000367740 RPP21Q9H633 154 aaKnown RBP8.6□□□□□ -1.03
VAMP4-202ENST00000367740 CCL25O15444 150 aa8.59□□□□□ -1.03
VAMP4-202ENST00000367740 APOMO95445 188 aa8.59□□□□□ -1.03
VAMP4-202ENST00000367740 RPL18AQ02543 176 aaKnown RBP8.59□□□□□ -1.03
VAMP4-202ENST00000367740 COTL1Q14019 142 aa8.59□□□□□ -1.03
VAMP4-202ENST00000367740 PPP1R1CQ8WVI7 109 aa8.59□□□□□ -1.03
VAMP4-202ENST00000367740 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
VAMP4-202ENST00000367740 UBE2G1P62253 170 aa8.58□□□□□ -1.04
VAMP4-202ENST00000367740 LCE4AQ5TA78 99 aa8.58□□□□□ -1.04
VAMP4-202ENST00000367740 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
VAMP4-202ENST00000367740 RASL11AQ6T310 242 aa8.58□□□□□ -1.04
VAMP4-202ENST00000367740 ISOC2Q96AB3 205 aa8.58□□□□□ -1.04
VAMP4-202ENST00000367740 FAM74A7A6NL05 159 aa8.57□□□□□ -1.04
VAMP4-202ENST00000367740 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
VAMP4-202ENST00000367740 FAM168BA1KXE4 195 aa8.56□□□□□ -1.04
VAMP4-202ENST00000367740 MPC2O95563 127 aa8.56□□□□□ -1.04
VAMP4-202ENST00000367740 H2BFSP57053 126 aa8.56□□□□□ -1.04
VAMP4-202ENST00000367740 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
VAMP4-202ENST00000367740 TSKUQ8WUA8 353 aa8.56□□□□□ -1.04
VAMP4-202ENST00000367740 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
VAMP4-202ENST00000367740 A0A087X002 238 aa8.55□□□□□ -1.04
VAMP4-202ENST00000367740 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
VAMP4-202ENST00000367740 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
VAMP4-202ENST00000367740 ATP6V0CP27449 155 aa8.55□□□□□ -1.04
VAMP4-202ENST00000367740 ACTR3CQ9C0K3 210 aaPredicted RBP8.55□□□□□ -1.04
VAMP4-202ENST00000367740 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
VAMP4-202ENST00000367740 CRYGAP11844 174 aa8.54□□□□□ -1.04
VAMP4-202ENST00000367740 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
VAMP4-202ENST00000367740 PSMG3Q9BT73 122 aaPredicted RBP8.54□□□□□ -1.04
VAMP4-202ENST00000367740 MBP02144 154 aa8.53□□□□□ -1.04
VAMP4-202ENST00000367740 PET100P0DJ07 73 aa8.53□□□□□ -1.04
VAMP4-202ENST00000367740 NTF3P20783 257 aa8.53□□□□□ -1.04
VAMP4-202ENST00000367740 ZNF726P1Q15940 193 aa8.53□□□□□ -1.04
VAMP4-202ENST00000367740 Q6ZNX1 250 aa8.53□□□□□ -1.04
VAMP4-202ENST00000367740 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
VAMP4-202ENST00000367740 KRTAP4-1Q9BYQ7 146 aa8.53□□□□□ -1.04
VAMP4-202ENST00000367740 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
VAMP4-202ENST00000367740 CD164L2Q6UWJ8 174 aa8.52□□□□□ -1.05
VAMP4-202ENST00000367740 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
VAMP4-202ENST00000367740 CCDC160A6NGH7 325 aa8.51□□□□□ -1.05
VAMP4-202ENST00000367740 H7C423 109 aa8.51□□□□□ -1.05
VAMP4-202ENST00000367740 BCL2L11O43521 198 aa8.51□□□□□ -1.05
VAMP4-202ENST00000367740 SERF2P84101 59 aa8.51□□□□□ -1.05
VAMP4-202ENST00000367740 EIF5AL1Q6IS14 154 aaKnown RBP8.51□□□□□ -1.05
VAMP4-202ENST00000367740 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
VAMP4-202ENST00000367740 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
VAMP4-202ENST00000367740 AKR1C3P42330 323 aa8.5□□□□□ -1.05
VAMP4-202ENST00000367740 KRTAP7-1Q8IUC3 87 aa8.5□□□□□ -1.05
VAMP4-202ENST00000367740 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
VAMP4-202ENST00000367740 TNFSF18Q9UNG2 199 aa8.5□□□□□ -1.05
VAMP4-202ENST00000367740 FAM240BA0A1B0GVZ2 78 aa8.49□□□□□ -1.05
VAMP4-202ENST00000367740 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
VAMP4-202ENST00000367740 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
VAMP4-202ENST00000367740 APCSP02743 223 aa8.48□□□□□ -1.05
VAMP4-202ENST00000367740 UBE2BP63146 152 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms