RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 Q8N976 141 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 ZNF106Q9H2Y7 1883 aaKnown RBP6.67□□□□□ -1.34
SYNE1-206ENST00000367253 RPS28P62857 69 aaKnown RBP6.66□□□□□ -1.34
SYNE1-206ENST00000367253 Q6ZRM9 215 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 C11orf52Q96A22 123 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
SYNE1-206ENST00000367253 HHLA3Q9XRX5 114 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 CSPG4Q6UVK1 2322 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 LINC00473A8K010 186 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 Q9H8V8 135 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 HIGD1BQ9P298 99 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 LINC01561Q8N1V8 128 aa6.66□□□□□ -1.34
SYNE1-206ENST00000367253 IGHV4-28A0A0C4DH34 117 aa6.65□□□□□ -1.34
SYNE1-206ENST00000367253 KLK9Q9UKQ9 250 aa6.65□□□□□ -1.34
SYNE1-206ENST00000367253 NAV2Q8IVL1 2488 aa6.65□□□□□ -1.34
SYNE1-206ENST00000367253 TCL1BO95988 128 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 CXCL6P80162 114 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 MLANAQ16655 118 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 AJUBAQ96IF1 538 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 KIAA1549LQ6ZVL6 1849 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 SHANK1Q9Y566 2161 aa6.65□□□□□ -1.35
SYNE1-206ENST00000367253 C2orf70A6NJV1 201 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 C10orf142B7Z368 130 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 ZNF134P52741 427 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 DENND4AQ7Z401 1863 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 IGLV2-18A0A075B6J9 118 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 XCL1P47992 114 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 ZNF726P1Q15940 193 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 COX7B2Q8TF08 81 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 F8P00451 2351 aa6.64□□□□□ -1.35
SYNE1-206ENST00000367253 IGKV1-27A0A075B6S5 117 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 RETNLBQ9BQ08 111 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 TRIAP1O43715 76 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 LENEPQ9Y5L5 61 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 IGHV4OR15-8A0A075B7B6 117 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 A0A087WW49 117 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 IGHV3-38A0A0C4DH36 116 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 PDE6GP18545 87 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 SND1-IT1Q9HBX3 110 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 LINC00336Q6ZUF6 198 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 QRFPP83859 136 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 SCXQ7RTU7 201 aa6.63□□□□□ -1.35
SYNE1-206ENST00000367253 MUC22E2RYF6 1773 aaPredicted RBP6.62□□□□□ -1.35
SYNE1-206ENST00000367253 ABCA2Q9BZC7 2435 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 HIGD2BQ4VC39 106 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 IGLV5-52A0A0A0MRZ9 124 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 C3orf84H3BNL1 204 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 LGALS9O00182 355 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 WIPF1O43516 503 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 ENHOQ6UWT2 76 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 Q6ZSV7 163 aa6.62□□□□□ -1.35
SYNE1-206ENST00000367253 K7EQD1 137 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 LINC00173Q6ZV60 143 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 TMEM61Q8N0U2 210 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 KLK12Q9UKR0 248 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 A6NDX4 124 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
SYNE1-206ENST00000367253 NCOR2Q9Y618 2525 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 TRBV7-6A0A0J9YX20 115 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 ZNF833PQ6ZTB9 187 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
SYNE1-206ENST00000367253 LECT2O14960 151 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 FER1L5A0AVI2 2057 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 IGHV1-58A0A0C4DH39 117 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 MRPS12O15235 138 aaKnown RBP6.6□□□□□ -1.35
SYNE1-206ENST00000367253 Q6P435 159 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 C19orf84I3L1E1 186 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 LTAP01374 205 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 CTSGP08311 255 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 UBE2D2P62837 147 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 WDR86Q86TI4 376 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 TMEM263Q8WUH6 116 aaKnown RBP6.6□□□□□ -1.35
SYNE1-206ENST00000367253 NACAE9PAV3 2078 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
SYNE1-206ENST00000367253 IGHV4-4A0A075B6R2 117 aa6.59□□□□□ -1.35
SYNE1-206ENST00000367253 A8MZ25 164 aa6.59□□□□□ -1.35
SYNE1-206ENST00000367253 LINC01006Q8NI28 216 aa6.59□□□□□ -1.35
SYNE1-206ENST00000367253 CEP350Q5VT06 3117 aa6.59□□□□□ -1.35
SYNE1-206ENST00000367253 ETV2O00321 342 aaPredicted RBP6.59□□□□□ -1.35
SYNE1-206ENST00000367253 REG3GQ6UW15 175 aa6.59□□□□□ -1.35
SYNE1-206ENST00000367253 LINC00205P59089 165 aa6.59□□□□□ -1.36
SYNE1-206ENST00000367253 NRACQ8N912 160 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 HIVEP3Q5T1R4 2406 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 H3BRN7 92 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 ATP5EP2Q5VTU8 51 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 FAM19A3Q7Z5A8 133 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 C5orf56Q8N8D9 126 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 NDUFA4L2Q9NRX3 87 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 DEFB4AO15263 64 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 FOXL2NBQ6ZUU3 175 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 ZNF491Q8N8L2 437 aa6.58□□□□□ -1.36
SYNE1-206ENST00000367253 HEATR5AQ86XA9 2040 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms