RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 IGHV3-30-3P0DP02 117 aa9.15□□□□□ -0.94
CDC42BPA-203ENST00000366766 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
CDC42BPA-203ENST00000366766 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
CDC42BPA-203ENST00000366766 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
CDC42BPA-203ENST00000366766 CCL18P55774 89 aa9.14□□□□□ -0.95
CDC42BPA-203ENST00000366766 hADV29S1A0JD25 119 aa9.14□□□□□ -0.95
CDC42BPA-203ENST00000366766 PRO0255Q9UI72 69 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 CLPSL1A2RUU4 121 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 TIMM17BO60830 172 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 APRG1Q8IVJ8 170 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 K7EQG2 157 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 UNQ9165/PRO28630Q6UXU0 137 aa9.13□□□□□ -0.95
CDC42BPA-203ENST00000366766 C5orf38Q86SI9 138 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 POLQO75417 2590 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 TMEM61Q8N0U2 210 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 RBM3P98179 157 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 HIST2H2BDQ6DRA6 164 aa9.12□□□□□ -0.95
CDC42BPA-203ENST00000366766 MUC7Q8TAX7 377 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 TRBV27A0A0K0K1C4 114 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 P0DMU3 169 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 WFDC2Q14508 124 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 PRO3102Q9H379 93 aa9.11□□□□□ -0.95
CDC42BPA-203ENST00000366766 ACANP16112 2415 aa9.1□□□□□ -0.95
CDC42BPA-203ENST00000366766 MAP6D1Q9H9H5 199 aa9.1□□□□□ -0.95
CDC42BPA-203ENST00000366766 TIRAPP58753 221 aa9.1□□□□□ -0.95
CDC42BPA-203ENST00000366766 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
CDC42BPA-203ENST00000366766 UBE2BP63146 152 aa9.1□□□□□ -0.95
CDC42BPA-203ENST00000366766 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 CLPSL2Q6UWE3 100 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 LINC00322Q6ZN03 302 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 J3KT08 172 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 MP68P56378 58 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 IGLV2-11P01706 119 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 RNASE8Q8TDE3 154 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 ZFAND2AQ8N6M9 145 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 UFSP1Q6NVU6 142 aa9.09□□□□□ -0.95
CDC42BPA-203ENST00000366766 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 FAM236AA0A1B0GUQ0 79 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 FAM236BA0A1B0GV22 79 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 NDUFB1O75438 58 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 MRGPRG-AS1Q2M3A8 158 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 Q6ZQT7 251 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 Q8N6K4 173 aa9.08□□□□□ -0.96
CDC42BPA-203ENST00000366766 C11orf71Q6IPW1 123 aa9.07□□□□□ -0.96
CDC42BPA-203ENST00000366766 NREPQ16612 68 aa9.07□□□□□ -0.96
CDC42BPA-203ENST00000366766 Q6YL49 198 aa9.07□□□□□ -0.96
CDC42BPA-203ENST00000366766 PRORYQ9H606 182 aa9.07□□□□□ -0.96
CDC42BPA-203ENST00000366766 A0A1B0GX51 115 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 M0QY20 66 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 MIR7-3HGQ8N6C7 128 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 A0A0J9YY99 117 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 TRBV12-3P01733 135 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 FRMD6-AS1P0C7T7 363 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 PSMB8P28062 276 aa9.06□□□□□ -0.96
CDC42BPA-203ENST00000366766 LECT2O14960 151 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 IL17DQ8TAD2 202 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 TCL1BO95988 128 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 ZNF580Q9UK33 172 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 KLLNB2CW77 178 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 Q6ZUT4 128 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 B5MCH6 92 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 RPL18AQ02543 176 aaKnown RBP9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
CDC42BPA-203ENST00000366766 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
CDC42BPA-203ENST00000366766 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-203ENST00000366766 TRBV6-4A0A1B0GX49 114 aa9.04□□□□□ -0.96
CDC42BPA-203ENST00000366766 COL27A1Q8IZC6 1860 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-203ENST00000366766 A0A096LPF7 62 aa9.04□□□□□ -0.96
CDC42BPA-203ENST00000366766 BRI3O95415 125 aa9.04□□□□□ -0.96
CDC42BPA-203ENST00000366766 DEFB114Q30KQ6 69 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 SMAD5-AS1Q9Y6J3 95 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 NFE4Q86UQ8 179 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 NRACQ8N912 160 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 SPATA25Q9BR10 227 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 IGLV4-3A0A075B6K6 122 aa9.03□□□□□ -0.96
CDC42BPA-203ENST00000366766 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.96
CDC42BPA-203ENST00000366766 COX8CQ7Z4L0 72 aa9.02□□□□□ -0.97
CDC42BPA-203ENST00000366766 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
CDC42BPA-203ENST00000366766 COX7BP24311 80 aa9.02□□□□□ -0.97
CDC42BPA-203ENST00000366766 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms