RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 RPL37AP61513 92 aaKnown RBP3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 ELOBQ15370 118 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 KCNIP4Q6PIL6 250 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 LINC00299Q6ZSB3 139 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 C15orf54Q8N8G6 183 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZC2HC1AQ96GY0 325 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 PSMG3Q9BT73 122 aaPredicted RBP3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 ACTR3CQ9C0K3 210 aaPredicted RBP3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 PHLDA3Q9Y5J5 127 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
RNU4-4P-201ENST00000364588 HMCN2Q8NDA2 5059 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 TRBV7-3A0A075B6L6 115 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 A8MU10 97 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 MBP02144 154 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 CRPP02741 224 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 ANGP03950 147 aaKnown RBP3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 TPT1P13693 172 aaKnown RBP3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 DEFA1P59665 94 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 DEFA3P59666 94 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 UBE2D3P61077 147 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 UBE2D2P62837 147 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 SERF2P84101 59 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 Q0VG73 95 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZNF726P1Q15940 193 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 MPV17L2Q567V2 206 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 DNLZQ5SXM8 178 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 ATRAIDQ6UW56 229 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 CLPSL2Q6UWE3 100 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 ENHOQ6UWT2 76 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 SFRP2Q96HF1 295 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 AQP10Q96PS8 301 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 ALG5Q9Y673 324 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
RNU4-4P-201ENST00000364588 TRBV6-8A0A0A6YYG3 113 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 TRBV10-1A0A0K0K1A3 114 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 CTXND1A0A1B0GTU2 59 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 FAM74A7A6NL05 159 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 PANO1I0J062 215 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 PTTG1O95997 202 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZNF56Q15929 161 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 Q5BKY6 102 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 FAM162BQ5T6X4 162 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 RPL7L1Q6DKI1 246 aaKnown RBP3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZFP82Q8N141 532 aa3.3□□□□□ -1.88
RNU4-4P-201ENST00000364588 A0A087WZ39 114 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 FXYD6-FXYD2A0A087WZ82 144 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 BORCS7-ASMTA0A0B4J1R7 106 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 MUC21A0A0G2JKD1 596 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 MUC21A0A140T8X8 626 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 RAB4BP61018 213 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 SSTP61278 116 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 UBE2G1P62253 170 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZNF674Q2M3X9 581 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 AKR1C8PQ5T2L2 129 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 OR10AG1Q8NH19 301 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 HIST1H2BAQ96A08 127 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 FMC1Q96HJ9 113 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 MED28Q9H204 178 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZFP30Q9Y2G7 519 aa3.29□□□□□ -1.88
RNU4-4P-201ENST00000364588 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 MAP1LC3B2A6NCE7 125 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 LTAP01374 205 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 AKR1C3P42330 323 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 RBX1P62877 108 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 MIAQ16674 131 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 NTM-AS1Q6ZSK4 140 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 COX8CQ7Z4L0 72 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 LINC00269Q8N2A0 174 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 C9orf163Q8N9P6 203 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 INO80EQ8NBZ0 244 aaPredicted RBP3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 STOML3Q8TAV4 291 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 ZNF471Q9BX82 626 aaPredicted RBP3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 MAP1LC3BQ9GZQ8 125 aa3.28□□□□□ -1.88
RNU4-4P-201ENST00000364588 TRBV6-1A0A0K0K1D8 114 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 A0A1B0GV50 99 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 GIPP09681 153 aaPredicted RBP3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 CHTF8P0CG12 524 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 FHITP49789 147 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 RAB5CP51148 216 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 SPANXN1Q5VSR9 72 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 KRTAP26-1Q6PEX3 210 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 SDIM1Q6ZPB5 146 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 DPH3Q96FX2 82 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 DERL1Q9BUN8 251 aa3.27□□□□□ -1.89
RNU4-4P-201ENST00000364588 TRBV25-1A0A075B6N4 114 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 A0A0D9SG52 128 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 SNAI2O43623 268 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 MGPP08493 103 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 SMIM17P0DL12 118 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 PKIAP61925 76 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 REG3AQ06141 175 aa3.26□□□□□ -1.89
RNU4-4P-201ENST00000364588 TMEM97Q5BJF2 176 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms