RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 MIAQ16674 131 aa8.27□□□□□ -1.08
CLIP1-203ENST00000361654 NUPR2A6NF83 97 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 DAND5Q8N907 189 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 LINC01006Q8NI28 216 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 PSMG3-AS1Q96PY0 264 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 FSHBP01225 129 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 FAM167A-AS1Q96KT0 104 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 IGKV1D-37A0A075B6S9 117 aa8.27□□□□□ -1.09
CLIP1-203ENST00000361654 NCKAP5O14513 1909 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 NUP210Q8TEM1 1887 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-203ENST00000361654 DOPEY1Q5JWR5 2465 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 PIEZO1Q92508 2521 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 K7ERS5 55 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 MSMPQ1L6U9 139 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 C9orf85Q96MD7 179 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 SS18L2Q9UHA2 77 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 COL4A3Q01955 1670 aa8.26□□□□□ -1.09
CLIP1-203ENST00000361654 CCDC168Q8NDH2 2452 aa8.25□□□□□ -1.09
CLIP1-203ENST00000361654 TRBV6-4A0A1B0GX49 114 aa8.25□□□□□ -1.09
CLIP1-203ENST00000361654 UBE2D3P61077 147 aa8.25□□□□□ -1.09
CLIP1-203ENST00000361654 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-203ENST00000361654 E9PLD3 99 aa8.25□□□□□ -1.09
CLIP1-203ENST00000361654 ODF1Q14990 250 aa8.25□□□□□ -1.09
CLIP1-203ENST00000361654 Q6ZUT4 128 aa8.25□□□□□ -1.09
CLIP1-203ENST00000361654 IGKV2D-26A0A0A0MRZ7 120 aa8.24□□□□□ -1.09
CLIP1-203ENST00000361654 BPY2O14599 106 aa8.24□□□□□ -1.09
CLIP1-203ENST00000361654 KPRPQ5T749 579 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-203ENST00000361654 LINC00574Q9H8X3 128 aa8.24□□□□□ -1.09
CLIP1-203ENST00000361654 TAX1BP3O14907 124 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 RBX1P62877 108 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 WISP2O76076 250 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 EBI3Q14213 229 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 ATOX1O00244 68 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 NDUFA7O95182 113 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 Q8N976 141 aa8.23□□□□□ -1.09
CLIP1-203ENST00000361654 TRBV6-8A0A0A6YYG3 113 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 C11orf71Q6IPW1 123 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 C11orf1Q9H5F2 150 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 NAV2Q8IVL1 2488 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 FRMD6-AS1P0C7T7 363 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 ANAPC1Q9H1A4 1944 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 E7EUB6 86 aa8.22□□□□□ -1.09
CLIP1-203ENST00000361654 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.09
CLIP1-203ENST00000361654 ZNF702PQ9H963 129 aa8.21□□□□□ -1.09
CLIP1-203ENST00000361654 HIVEP3Q5T1R4 2406 aa8.21□□□□□ -1.09
CLIP1-203ENST00000361654 LOC107984640A0A0U1RRK4 108 aa8.21□□□□□ -1.1
CLIP1-203ENST00000361654 PRB2P02812 416 aaPredicted RBP8.21□□□□□ -1.1
CLIP1-203ENST00000361654 DENND4CQ5VZ89 1909 aa8.21□□□□□ -1.1
CLIP1-203ENST00000361654 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
CLIP1-203ENST00000361654 LY6LH3BQJ8 138 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 H3BT86 120 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 LELP1Q5T871 98 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 HIGD1BQ9P298 99 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 MBD6Q96DN6 1003 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 TP53TG3Q9ULZ0 132 aa8.2□□□□□ -1.1
CLIP1-203ENST00000361654 IBA57-AS1B1ANH7 110 aa8.19□□□□□ -1.1
CLIP1-203ENST00000361654 HIST2H2BDQ6DRA6 164 aa8.19□□□□□ -1.1
CLIP1-203ENST00000361654 CEMP1Q6PRD7 247 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-203ENST00000361654 BBC3Q96PG8 261 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-203ENST00000361654 NOTCH4Q99466 2003 aa8.19□□□□□ -1.1
CLIP1-203ENST00000361654 NAV3Q8IVL0 2385 aa8.19□□□□□ -1.1
CLIP1-203ENST00000361654 TCL1BO95988 128 aa8.19□□□□□ -1.1
CLIP1-203ENST00000361654 SPANXB1Q9NS25 103 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-203ENST00000361654 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
CLIP1-203ENST00000361654 G3V4G9 280 aa8.17□□□□□ -1.1
CLIP1-203ENST00000361654 UBE2D2P62837 147 aa8.17□□□□□ -1.1
CLIP1-203ENST00000361654 NEXN-AS1Q8NBZ9 246 aa8.17□□□□□ -1.1
CLIP1-203ENST00000361654 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
CLIP1-203ENST00000361654 LINC00467Q9BRT7 94 aa8.17□□□□□ -1.1
CLIP1-203ENST00000361654 ZNF106Q9H2Y7 1883 aaKnown RBP8.17□□□□□ -1.1
CLIP1-203ENST00000361654 DHRS4-AS1Q9P1J3 65 aa8.17□□□□□ -1.1
CLIP1-203ENST00000361654 A0A0J9YWU9 116 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 KMT2EQ8IZD2 1858 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 SPATA12Q7Z6I5 190 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 TEN1Q86WV5 123 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 SVIPQ8NHG7 77 aa8.16□□□□□ -1.1
CLIP1-203ENST00000361654 NDUFC2O95298 119 aa8.15□□□□□ -1.1
CLIP1-203ENST00000361654 CLEC2BQ92478 149 aa8.15□□□□□ -1.1
CLIP1-203ENST00000361654 C19orf71A6NCJ1 209 aa8.15□□□□□ -1.1
CLIP1-203ENST00000361654 NANOS2P60321 138 aaKnown RBP8.15□□□□□ -1.1
CLIP1-203ENST00000361654 TMEM131Q92545 1883 aa8.15□□□□□ -1.11
CLIP1-203ENST00000361654 M0R378 163 aa8.14□□□□□ -1.11
CLIP1-203ENST00000361654 U3KQK5 164 aa8.14□□□□□ -1.11
CLIP1-203ENST00000361654 TP73-AS1Q9UF72 201 aa8.14□□□□□ -1.11
CLIP1-203ENST00000361654 PLAC8L1A1L4L8 177 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 IGLV2-14P01704 120 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 RPL28P46779 137 aaKnown RBP8.13□□□□□ -1.11
CLIP1-203ENST00000361654 C10orf99Q6UWK7 81 aa8.13□□□□□ -1.11
CLIP1-203ENST00000361654 CDKN2A-AS1Q9UH64 79 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms