RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 A0A087WZ39 114 aa13.38□□□□□ -0.27
CACNA1A-201ENST00000360228 K7ENP7 123 aa13.38□□□□□ -0.27
CACNA1A-201ENST00000360228 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
CACNA1A-201ENST00000360228 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
CACNA1A-201ENST00000360228 Q6ZR03 302 aa13.38□□□□□ -0.27
CACNA1A-201ENST00000360228 Q8N9W7 124 aa13.37□□□□□ -0.27
CACNA1A-201ENST00000360228 IGKV1D-37A0A075B6S9 117 aa13.37□□□□□ -0.27
CACNA1A-201ENST00000360228 SIRPDQ9H106 197 aa13.37□□□□□ -0.27
CACNA1A-201ENST00000360228 IGKV1-17P01599 117 aa13.37□□□□□ -0.27
CACNA1A-201ENST00000360228 COL4A5P29400 1685 aa13.36□□□□□ -0.27
CACNA1A-201ENST00000360228 C9orf85Q96MD7 179 aa13.36□□□□□ -0.27
CACNA1A-201ENST00000360228 NFE4Q86UQ8 179 aa13.35□□□□□ -0.27
CACNA1A-201ENST00000360228 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
CACNA1A-201ENST00000360228 SNURFQ9Y675 71 aa13.35□□□□□ -0.27
CACNA1A-201ENST00000360228 J3QKU1 62 aa13.35□□□□□ -0.27
CACNA1A-201ENST00000360228 MIAQ16674 131 aa13.35□□□□□ -0.27
CACNA1A-201ENST00000360228 MSRB1Q9NZV6 116 aa13.34□□□□□ -0.27
CACNA1A-201ENST00000360228 UBE2D4Q9Y2X8 147 aa13.34□□□□□ -0.27
CACNA1A-201ENST00000360228 C3orf84H3BNL1 204 aa13.34□□□□□ -0.27
CACNA1A-201ENST00000360228 FAM222AQ5U5X8 452 aa13.34□□□□□ -0.27
CACNA1A-201ENST00000360228 HRCT1Q6UXD1 115 aa13.33□□□□□ -0.27
CACNA1A-201ENST00000360228 FOXL2NBQ6ZUU3 175 aa13.33□□□□□ -0.28
CACNA1A-201ENST00000360228 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
CACNA1A-201ENST00000360228 FAM19A1Q7Z5A9 133 aa13.32□□□□□ -0.28
CACNA1A-201ENST00000360228 AJUBAQ96IF1 538 aa13.32□□□□□ -0.28
CACNA1A-201ENST00000360228 IL17DQ8TAD2 202 aa13.32□□□□□ -0.28
CACNA1A-201ENST00000360228 LINC00269Q8N2A0 174 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 FN1P02751 2386 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 COX7CP15954 63 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 IGHV4-38-2P0DP08 117 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 UBE2D1P51668 147 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 C1orf158Q8N1D5 194 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 C2orf70A6NJV1 201 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 SPINK6Q6UWN8 80 aa13.31□□□□□ -0.28
CACNA1A-201ENST00000360228 ODF1Q14990 250 aa13.3□□□□□ -0.28
CACNA1A-201ENST00000360228 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
CACNA1A-201ENST00000360228 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
CACNA1A-201ENST00000360228 PRSS33Q8NF86 280 aa13.29□□□□□ -0.28
CACNA1A-201ENST00000360228 RITA1Q96K30 269 aa13.29□□□□□ -0.28
CACNA1A-201ENST00000360228 M0QXV9 152 aa13.29□□□□□ -0.28
CACNA1A-201ENST00000360228 CRYGDP07320 174 aa13.29□□□□□ -0.28
CACNA1A-201ENST00000360228 UBE2D3P61077 147 aa13.28□□□□□ -0.28
CACNA1A-201ENST00000360228 SLPIP03973 132 aa13.28□□□□□ -0.28
CACNA1A-201ENST00000360228 SMAD5-AS1Q9Y6J3 95 aa13.28□□□□□ -0.28
CACNA1A-201ENST00000360228 ZFAND3Q9H8U3 227 aa13.27□□□□□ -0.28
CACNA1A-201ENST00000360228 MDFICQ9P1T7 246 aa13.27□□□□□ -0.28
CACNA1A-201ENST00000360228 MED14OSP0DP75 135 aa13.27□□□□□ -0.28
CACNA1A-201ENST00000360228 WT1P19544 449 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 UFSP1Q6NVU6 142 aa13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 LINC00694P0DN24 101 aa13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 SPATA12Q7Z6I5 190 aa13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 C4orf3Q8WVX3 66 aa13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 ZNF503-AS2A6NEH8 195 aa13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 C11orf45Q8TAV5 145 aa13.27□□□□□ -0.29
CACNA1A-201ENST00000360228 PRYO14603 147 aa13.26□□□□□ -0.29
CACNA1A-201ENST00000360228 DEFB113Q30KQ7 82 aa13.26□□□□□ -0.29
CACNA1A-201ENST00000360228 IGHV7-81A0A0B4J1V7 117 aa13.26□□□□□ -0.29
CACNA1A-201ENST00000360228 NUPR1O60356 82 aa13.26□□□□□ -0.29
CACNA1A-201ENST00000360228 KAAG1Q9UBP8 84 aa13.26□□□□□ -0.29
CACNA1A-201ENST00000360228 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 FHL1Q13642 323 aa13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 FAM19A5Q7Z5A7 132 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 CEMP1Q6PRD7 247 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 IGHV4-61A0A0C4DH41 118 aa13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 C5orf56Q8N8D9 126 aa13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 REG3AQ06141 175 aa13.25□□□□□ -0.29
CACNA1A-201ENST00000360228 CCKP06307 115 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 CRIPAKQ8N1N5 446 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 ZFAND2AQ8N6M9 145 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 P0DMU3 169 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 I3L2K1 104 aa13.24□□□□□ -0.29
CACNA1A-201ENST00000360228 IGLV1-44P01699 117 aa13.23□□□□□ -0.29
CACNA1A-201ENST00000360228 K7EIM0 57 aa13.23□□□□□ -0.29
CACNA1A-201ENST00000360228 NANOS2P60321 138 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-201ENST00000360228 C7orf33Q8WU49 177 aa13.23□□□□□ -0.29
CACNA1A-201ENST00000360228 DCANP1Q8TF63 244 aa13.23□□□□□ -0.29
CACNA1A-201ENST00000360228 CTRLP40313 264 aa13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 IGLV11-55A0A075B6I3 123 aa13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 MIFP14174 115 aa13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 FAM30AQ9NZY2 134 aa13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 PRO0255Q9UI72 69 aa13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 Q6ZVQ6 151 aa13.22□□□□□ -0.29
CACNA1A-201ENST00000360228 SMIM9A6NGZ8 99 aa13.21□□□□□ -0.29
CACNA1A-201ENST00000360228 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.21□□□□□ -0.3
CACNA1A-201ENST00000360228 UBE2D2P62837 147 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 POLQO75417 2590 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 IGFL3Q6UXB1 125 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 X6R8D5 127 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 A0A0J9YXY3 114 aa13.2□□□□□ -0.3
CACNA1A-201ENST00000360228 WFDC13Q8IUB5 93 aa13.19□□□□□ -0.3
CACNA1A-201ENST00000360228 PIEZO1Q92508 2521 aa13.19□□□□□ -0.3
CACNA1A-201ENST00000360228 DEFB1P60022 68 aa13.19□□□□□ -0.3
CACNA1A-201ENST00000360228 SPRY4Q9C004 299 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms