RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CNEP1R1Q8N9A8 125 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 ARFGEF3Q5TH69 2177 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 TRAV41A0A0B4J266 112 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 NANOS2P60321 138 aaKnown RBP3.18□□□□□ -1.9
PTPN22-201ENST00000359785 NPC2P61916 151 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 FHL2Q14192 279 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 WFDC3Q8IUB2 231 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 CDC42SE2Q9NRR3 84 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 TRAV13-1A0A0B4J241 112 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 BAALC-AS2P0C853 105 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 ATP5J2P56134 94 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 SPATA3Q8NHX4 192 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 BSNQ9UPA5 3926 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 TMSB15BA0A087X1C1 80 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 TMEM256-PLSCR3K7ERE1 68 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 CNIH1O95406 144 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 FP248Q71RG6 208 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-201ENST00000359785 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-201ENST00000359785 C16orf92Q96LL3 132 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 OTOGLQ3ZCN5 2332 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 ZGRF1Q86YA3 2104 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 PRSS2P07478 247 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 Q8IZM0 81 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 CCL21O00585 134 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV3-48P01763 117 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 CLEC2BQ92478 149 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 LINC00846Q9NV44 126 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 A0A0U1RQV1 116 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-201ENST00000359785 GOLGB1Q14789 3259 aaKnown RBP3.16□□□□□ -1.9
PTPN22-201ENST00000359785 ZNF561-AS1K7EIQ3 104 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 TGFAP01135 160 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 XCL1P47992 114 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 LINC00337Q8N6G1 96 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 XCL2Q9UBD3 114 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 CCL24O00175 119 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 VPREB1P12018 145 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 C10orf105Q8TEF2 133 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.9
PTPN22-201ENST00000359785 A0A096LNT2 108 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-21A0A0B4J1V1 117 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 GNRH2O43555 120 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 CD28P10747 220 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 GHRHP01286 108 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 IGLV6-57P01721 117 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-11P01762 117 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 SPINK2P20155 84 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 FAM27E3Q08E93 113 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 INTS1Q8N201 2190 aaKnown RBP3.15□□□□□ -1.91
PTPN22-201ENST00000359785 CMC4P56277 68 aaPredicted RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 Q8N814 137 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 ORMDL1Q9P0S3 153 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 TRAV12-3A0A0B4J271 114 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RBMY1A1P0DJD3 496 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RBMY1CP0DJD4 496 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RPL11P62913 178 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RBMY1FQ15415 496 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 AVPP01185 164 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 PFN2P35080 140 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 UNQ9165/PRO28630Q6UXU0 137 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 Q6ZTC4 211 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 SPENQ96T58 3664 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 A0A0J9YWU9 116 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 SYNJ2BPP57105 145 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 ELOF1P60002 83 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 SMIM11BQ8TCY0 68 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 DIDO1Q9BTC0 2240 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-66A0A0C4DH42 116 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 BLCAPP62952 87 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 CLEC19AQ6UXS0 136 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 UBE2E2Q96LR5 201 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 PLA2G2DQ9UNK4 145 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 DNAL4O96015 105 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 CRPP02741 224 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 S100A4P26447 101 aaKnown RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 ZFP36P26651 326 aaKnown RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 LINC01547P58512 204 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 SNRPD3P62318 126 aaKnown RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 COX6A2Q02221 97 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms