RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 C20orf173Q96LM9 149 aa12.09□□□□□ -0.47
COL18A1-203ENST00000359759 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
COL18A1-203ENST00000359759 DSCAML1Q8TD84 2053 aa12.09□□□□□ -0.47
COL18A1-203ENST00000359759 PRR15LQ9BU68 103 aa12.08□□□□□ -0.47
COL18A1-203ENST00000359759 PPDPFQ9H3Y8 114 aa12.08□□□□□ -0.48
COL18A1-203ENST00000359759 A0A1B0GXF2 115 aa12.08□□□□□ -0.48
COL18A1-203ENST00000359759 A6NED7 52 aa12.08□□□□□ -0.48
COL18A1-203ENST00000359759 MRPS12O15235 138 aaKnown RBP12.08□□□□□ -0.48
COL18A1-203ENST00000359759 SPINK6Q6UWN8 80 aa12.08□□□□□ -0.48
COL18A1-203ENST00000359759 PIP4P1Q86T03 277 aa12.08□□□□□ -0.48
COL18A1-203ENST00000359759 PROK1P58294 105 aa12.07□□□□□ -0.48
COL18A1-203ENST00000359759 IGLV2-8P01709 118 aa12.07□□□□□ -0.48
COL18A1-203ENST00000359759 WFDC13Q8IUB5 93 aa12.07□□□□□ -0.48
COL18A1-203ENST00000359759 A8MZ25 164 aa12.07□□□□□ -0.48
COL18A1-203ENST00000359759 FAM222AQ5U5X8 452 aa12.07□□□□□ -0.48
COL18A1-203ENST00000359759 ZFAND3Q9H8U3 227 aa12.07□□□□□ -0.48
COL18A1-203ENST00000359759 DNAJC9-AS1A6NH13 148 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 FAM30AQ9NZY2 134 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 IGKV2-28A0A075B6P5 120 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 IGKV2D-28P01615 120 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 IGLV1-47P01700 117 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 CCKP06307 115 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 RIF1Q5UIP0 2472 aaKnown RBP12.06□□□□□ -0.48
COL18A1-203ENST00000359759 ANAPC1Q9H1A4 1944 aa12.06□□□□□ -0.48
COL18A1-203ENST00000359759 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
COL18A1-203ENST00000359759 ROS1P08922 2347 aa12.05□□□□□ -0.48
COL18A1-203ENST00000359759 IGLV4-3A0A075B6K6 122 aa12.05□□□□□ -0.48
COL18A1-203ENST00000359759 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
COL18A1-203ENST00000359759 A6NDX4 124 aa12.04□□□□□ -0.48
COL18A1-203ENST00000359759 C14orf177Q52M58 125 aa12.04□□□□□ -0.48
COL18A1-203ENST00000359759 CCDC179H3BU77 68 aa12.03□□□□□ -0.48
COL18A1-203ENST00000359759 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
COL18A1-203ENST00000359759 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
COL18A1-203ENST00000359759 Q6ZSR3 168 aa12.02□□□□□ -0.49
COL18A1-203ENST00000359759 C11orf1Q9H5F2 150 aa12.02□□□□□ -0.49
COL18A1-203ENST00000359759 TIMM17BO60830 172 aa12.02□□□□□ -0.49
COL18A1-203ENST00000359759 KIF26AQ9ULI4 1882 aaPredicted RBP12.01□□□□□ -0.49
COL18A1-203ENST00000359759 IGFL2Q6UWQ7 119 aa12.01□□□□□ -0.49
COL18A1-203ENST00000359759 MSMPQ1L6U9 139 aa12.01□□□□□ -0.49
COL18A1-203ENST00000359759 ATP5EP2Q5VTU8 51 aa12.01□□□□□ -0.49
COL18A1-203ENST00000359759 C22orf34Q6ZV56 151 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 POM121L12Q8N7R1 296 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 MED13Q9UHV7 2174 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 ZGRF1Q86YA3 2104 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 TRBV27A0A0K0K1C4 114 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 WISP2O76076 250 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 NDUFA7O95182 113 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 C9orf85Q96MD7 179 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 LINC00482Q8N8I6 264 aa12□□□□□ -0.49
COL18A1-203ENST00000359759 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
COL18A1-203ENST00000359759 CFAP126Q5VTH2 177 aa11.99□□□□□ -0.49
COL18A1-203ENST00000359759 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
COL18A1-203ENST00000359759 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
COL18A1-203ENST00000359759 RPL37AP8A6NKH3 93 aa11.98□□□□□ -0.49
COL18A1-203ENST00000359759 ZNF106Q9H2Y7 1883 aaKnown RBP11.98□□□□□ -0.49
COL18A1-203ENST00000359759 Q8N976 141 aa11.98□□□□□ -0.49
COL18A1-203ENST00000359759 IBA57-AS1B1ANH7 110 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 PLXNB3Q9ULL4 1909 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 IGLV9-49A0A0B4J1Y8 123 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 SPRY4Q9C004 299 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 SERP1Q9Y6X1 66 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 CRIP1P50238 77 aa11.97□□□□□ -0.49
COL18A1-203ENST00000359759 C1orf229Q6ZS94 237 aaPredicted RBP11.97□□□□□ -0.49
COL18A1-203ENST00000359759 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.97□□□□□ -0.493e-8■■■□□ 15.4
COL18A1-203ENST00000359759 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.96□□□□□ -0.49
COL18A1-203ENST00000359759 SERP2Q8N6R1 65 aa11.96□□□□□ -0.5
COL18A1-203ENST00000359759 RNF185Q96GF1 192 aa11.96□□□□□ -0.5
COL18A1-203ENST00000359759 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.5
COL18A1-203ENST00000359759 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 C1orf195Q5TG92 126 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 M0R2N4 97 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 MALRD1Q5VYJ5 2156 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 FAM19A3Q7Z5A8 133 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 H7C423 109 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 INSL3P51460 131 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
COL18A1-203ENST00000359759 M0QY20 66 aa11.94□□□□□ -0.5
COL18A1-203ENST00000359759 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
COL18A1-203ENST00000359759 RETNQ9HD89 108 aa11.94□□□□□ -0.5
COL18A1-203ENST00000359759 LYRM9A8MSI8 78 aa11.94□□□□□ -0.5
COL18A1-203ENST00000359759 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
COL18A1-203ENST00000359759 Q6ZQY7 126 aa11.93□□□□□ -0.5
COL18A1-203ENST00000359759 PLCE1Q9P212 2302 aa11.93□□□□□ -0.5
COL18A1-203ENST00000359759 SMIM11BQ8TCY0 68 aa11.93□□□□□ -0.5
COL18A1-203ENST00000359759 LY6LH3BQJ8 138 aa11.93□□□□□ -0.5
COL18A1-203ENST00000359759 UBE2D1P51668 147 aa11.93□□□□□ -0.5
COL18A1-203ENST00000359759 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
COL18A1-203ENST00000359759 NUP210Q8TEM1 1887 aaPredicted RBP11.93□□□□□ -0.5
COL18A1-203ENST00000359759 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
COL18A1-203ENST00000359759 ATP5EP56381 51 aaPredicted RBP11.92□□□□□ -0.5
COL18A1-203ENST00000359759 HILS1P60008 231 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 NOTCH3Q9UM47 2321 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 Q8N9L7 120 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 ODF3Q96PU9 254 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 TANC1Q9C0D5 1861 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 DAZAP2Q15038 168 aaPredicted RBP11.92□□□□□ -0.5
COL18A1-203ENST00000359759 ADAMTS9Q9P2N4 1935 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms