RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 DEFB104AQ8WTQ1 72 aa10.24□□□□□ -0.77
CCNE1-202ENST00000357943 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
CCNE1-202ENST00000357943 GTSF1LQ9H1H1 148 aa10.24□□□□□ -0.77
CCNE1-202ENST00000357943 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
CCNE1-202ENST00000357943 TNFRSF6BO95407 300 aa10.23□□□□□ -0.77
CCNE1-202ENST00000357943 NPYP01303 97 aa10.23□□□□□ -0.77
CCNE1-202ENST00000357943 PPBPP02775 128 aa10.23□□□□□ -0.77
CCNE1-202ENST00000357943 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
CCNE1-202ENST00000357943 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
CCNE1-202ENST00000357943 C18orf32Q8TCD1 76 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 TMEM70Q9BUB7 260 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 RYR2Q92736 4967 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 PPP1R17O96001 155 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 FABP4P15090 132 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 DDTP30046 118 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
CCNE1-202ENST00000357943 LGALS9CQ6DKI2 356 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 LINC00476Q8WZB0 136 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 TMEM18Q96B42 140 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 HIST1H2BLQ99880 126 aa10.22□□□□□ -0.77
CCNE1-202ENST00000357943 POLR2KP53803 58 aaKnown RBP10.21□□□□□ -0.78
CCNE1-202ENST00000357943 DNAH2Q9P225 4427 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 LY6G6CO95867 125 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 TIRAPP58753 221 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 LINC00310P59036 64 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 IQCJQ1A5X6 159 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 BAGE3Q86Y29 109 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 MRPS16Q9Y3D3 137 aaKnown RBP10.2□□□□□ -0.78
CCNE1-202ENST00000357943 DNAH6Q9C0G6 4158 aa10.2□□□□□ -0.78
CCNE1-202ENST00000357943 NUPR1O60356 82 aa10.19□□□□□ -0.78
CCNE1-202ENST00000357943 LELP1Q5T871 98 aa10.19□□□□□ -0.78
CCNE1-202ENST00000357943 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
CCNE1-202ENST00000357943 RYR3Q15413 4870 aa10.19□□□□□ -0.78
CCNE1-202ENST00000357943 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 SERF1AO75920 110 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 ESDP10768 282 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 C14orf144Q96I85 54 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 LAMTOR2Q9Y2Q5 125 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 I3L3M4 83 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 PMCHP20382 165 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 MRPL52Q86TS9 123 aaKnown RBP10.18□□□□□ -0.78
CCNE1-202ENST00000357943 WFDC10BQ8IUB3 73 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 UPK3BQ9BT76 320 aa10.18□□□□□ -0.78
CCNE1-202ENST00000357943 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
CCNE1-202ENST00000357943 VCYO14598 125 aa10.17□□□□□ -0.78
CCNE1-202ENST00000357943 COTL1Q14019 142 aa10.17□□□□□ -0.78
CCNE1-202ENST00000357943 SMIM2Q9BVW6 85 aa10.17□□□□□ -0.78
CCNE1-202ENST00000357943 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
CCNE1-202ENST00000357943 TSHBP01222 138 aa10.16□□□□□ -0.78
CCNE1-202ENST00000357943 RPL32P62910 135 aaKnown RBP10.16□□□□□ -0.78
CCNE1-202ENST00000357943 MAP1LC3AQ9H492 121 aa10.16□□□□□ -0.78
CCNE1-202ENST00000357943 DNAH10Q8IVF4 4471 aa10.16□□□□□ -0.78
CCNE1-202ENST00000357943 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
CCNE1-202ENST00000357943 TMEM97Q5BJF2 176 aa10.15□□□□□ -0.78
CCNE1-202ENST00000357943 NIT1Q86X76 327 aa10.15□□□□□ -0.78
CCNE1-202ENST00000357943 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.78
CCNE1-202ENST00000357943 Q9H8V8 135 aa10.15□□□□□ -0.78
CCNE1-202ENST00000357943 IGLV2-18A0A075B6J9 118 aa10.15□□□□□ -0.79
CCNE1-202ENST00000357943 TRAV8-6A0A0B4J262 113 aa10.15□□□□□ -0.79
CCNE1-202ENST00000357943 KIR2DL4Q99706 377 aa10.15□□□□□ -0.79
CCNE1-202ENST00000357943 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
CCNE1-202ENST00000357943 LCE6AA0A183 80 aa10.14□□□□□ -0.79
CCNE1-202ENST00000357943 SIVA1O15304 175 aa10.14□□□□□ -0.79
CCNE1-202ENST00000357943 AMTP48728 403 aa10.14□□□□□ -0.79
CCNE1-202ENST00000357943 TCAPO15273 167 aa10.13□□□□□ -0.79
CCNE1-202ENST00000357943 FCER1GP30273 86 aa10.13□□□□□ -0.79
CCNE1-202ENST00000357943 IFI27P40305 119 aaPredicted RBP10.13□□□□□ -0.79
CCNE1-202ENST00000357943 Q8N3U1 123 aa10.13□□□□□ -0.79
CCNE1-202ENST00000357943 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
CCNE1-202ENST00000357943 LINC00614P0C842 121 aa10.12□□□□□ -0.79
CCNE1-202ENST00000357943 RNASEKQ6P5S7 137 aaKnown RBP10.12□□□□□ -0.79
CCNE1-202ENST00000357943 Q8N8P6 123 aa10.12□□□□□ -0.79
CCNE1-202ENST00000357943 CHCHD1Q96BP2 118 aaKnown RBP10.12□□□□□ -0.79
CCNE1-202ENST00000357943 TMEM243Q9BU79 118 aa10.12□□□□□ -0.79
CCNE1-202ENST00000357943 CHCHD7Q9BUK0 85 aa10.12□□□□□ -0.79
CCNE1-202ENST00000357943 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
CCNE1-202ENST00000357943 PRSS3P2Q8NHM4 247 aa10.11□□□□□ -0.79
CCNE1-202ENST00000357943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
CCNE1-202ENST00000357943 IGKV2-29A2NJV5 120 aaPredicted RBP10.11□□□□□ -0.79
CCNE1-202ENST00000357943 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
CCNE1-202ENST00000357943 GAGE6Q13070 117 aa10.11□□□□□ -0.79
CCNE1-202ENST00000357943 HSBP1O75506 76 aa10.1□□□□□ -0.79
CCNE1-202ENST00000357943 IGHV3-30P01768 117 aa10.1□□□□□ -0.79
CCNE1-202ENST00000357943 IGHV3-33P01772 117 aa10.1□□□□□ -0.79
CCNE1-202ENST00000357943 IGHV3-30-3P0DP02 117 aa10.1□□□□□ -0.79
CCNE1-202ENST00000357943 IGHV3-30-5P0DP03 117 aa10.1□□□□□ -0.79
CCNE1-202ENST00000357943 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
CCNE1-202ENST00000357943 NXT2Q9NPJ8 142 aaKnown RBP10.1□□□□□ -0.79
CCNE1-202ENST00000357943 MPV17L2Q567V2 206 aa10.09□□□□□ -0.79
CCNE1-202ENST00000357943 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
CCNE1-202ENST00000357943 FAM19A2Q8N3H0 131 aa10.09□□□□□ -0.79
CCNE1-202ENST00000357943 ZNF664Q8N3J9 261 aa10.09□□□□□ -0.79
CCNE1-202ENST00000357943 A0A087WX48 190 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms