RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 TNFRSF18Q9Y5U5 241 aa17.34■□□□□ 0.37
NPAS3-203ENST00000357798 CLEC2BQ92478 149 aa17.34■□□□□ 0.37
NPAS3-203ENST00000357798 NBASA2RRP1 2371 aa17.32■□□□□ 0.36
NPAS3-203ENST00000357798 RNASE13Q5GAN3 156 aaKnown RBP17.32■□□□□ 0.36
NPAS3-203ENST00000357798 CHCHD7Q9BUK0 85 aa17.32■□□□□ 0.36
NPAS3-203ENST00000357798 UBE2D4Q9Y2X8 147 aa17.32■□□□□ 0.36
NPAS3-203ENST00000357798 CEP295Q9C0D2 2601 aa17.31■□□□□ 0.36
NPAS3-203ENST00000357798 TMEM95Q3KNT9 176 aa17.31■□□□□ 0.36
NPAS3-203ENST00000357798 Q6ZSV7 163 aa17.31■□□□□ 0.36
NPAS3-203ENST00000357798 IGHV3-73A0A0B4J1V6 119 aa17.3■□□□□ 0.36
NPAS3-203ENST00000357798 PROK1P58294 105 aa17.3■□□□□ 0.36
NPAS3-203ENST00000357798 NPC2P61916 151 aa17.3■□□□□ 0.36
NPAS3-203ENST00000357798 COL6A6A6NMZ7 2263 aa17.29■□□□□ 0.36
NPAS3-203ENST00000357798 TMEM89A2RUT3 159 aa17.29■□□□□ 0.36
NPAS3-203ENST00000357798 A8MZ25 164 aa17.29■□□□□ 0.36
NPAS3-203ENST00000357798 RBMY1A1P0DJD3 496 aaKnown RBP17.28■□□□□ 0.36
NPAS3-203ENST00000357798 RBMY1CP0DJD4 496 aa17.28■□□□□ 0.36
NPAS3-203ENST00000357798 RBMY1FQ15415 496 aaKnown RBP17.28■□□□□ 0.36
NPAS3-203ENST00000357798 C10orf105Q8TEF2 133 aa17.28■□□□□ 0.36
NPAS3-203ENST00000357798 ZFHX3Q15911 3703 aa17.27■□□□□ 0.36
NPAS3-203ENST00000357798 PIK3CD-AS1Q5SR53 167 aa17.27■□□□□ 0.36
NPAS3-203ENST00000357798 NDUFA1O15239 70 aa17.27■□□□□ 0.35
NPAS3-203ENST00000357798 DUX3Q96PT4 197 aa17.26■□□□□ 0.35
NPAS3-203ENST00000357798 TRBV7-7A0A0K0K1E9 115 aa17.25■□□□□ 0.35
NPAS3-203ENST00000357798 DOPEY2Q9Y3R5 2298 aa17.24■□□□□ 0.35
NPAS3-203ENST00000357798 IGLV5-45A0A087WSX0 123 aa17.24■□□□□ 0.35
NPAS3-203ENST00000357798 C19orf84I3L1E1 186 aa17.24■□□□□ 0.35
NPAS3-203ENST00000357798 TIRAPP58753 221 aa17.24■□□□□ 0.35
NPAS3-203ENST00000357798 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.24■□□□□ 0.35
NPAS3-203ENST00000357798 IGKV2-29A2NJV5 120 aaPredicted RBP17.24■□□□□ 0.35
NPAS3-203ENST00000357798 SYNJ2BPP57105 145 aa17.23■□□□□ 0.35
NPAS3-203ENST00000357798 NACAE9PAV3 2078 aa17.23■□□□□ 0.35
NPAS3-203ENST00000357798 SPTAN1Q13813 2472 aaKnown RBP17.23■□□□□ 0.35
NPAS3-203ENST00000357798 LINC00467Q9BRT7 94 aa17.23■□□□□ 0.35
NPAS3-203ENST00000357798 MSMBP08118 114 aa17.23■□□□□ 0.35
NPAS3-203ENST00000357798 C10orf99Q6UWK7 81 aa17.23■□□□□ 0.35
NPAS3-203ENST00000357798 CIRBPQ14011 172 aaKnown RBP17.22■□□□□ 0.35
NPAS3-203ENST00000357798 DNAJC30Q96LL9 226 aa17.22■□□□□ 0.35
NPAS3-203ENST00000357798 A8MTW9 85 aa17.22■□□□□ 0.35
NPAS3-203ENST00000357798 Q6ZSN1 163 aa17.22■□□□□ 0.35
NPAS3-203ENST00000357798 CITED2Q99967 270 aaPredicted RBP17.22■□□□□ 0.35
NPAS3-203ENST00000357798 CDKN2A-AS1Q9UH64 79 aa17.22■□□□□ 0.35
NPAS3-203ENST00000357798 HIVEP3Q5T1R4 2406 aa17.21■□□□□ 0.35
NPAS3-203ENST00000357798 AKAP6Q13023 2319 aa17.21■□□□□ 0.35
NPAS3-203ENST00000357798 KNCNA6PVL3 124 aa17.21■□□□□ 0.35
NPAS3-203ENST00000357798 HTN1P15515 57 aa17.21■□□□□ 0.35
NPAS3-203ENST00000357798 ZNF415Q09FC8 603 aa17.21■□□□□ 0.35
NPAS3-203ENST00000357798 Q9UF83 564 aa17.21■□□□□ 0.35
NPAS3-203ENST00000357798 ACYP1P07311 99 aa17.2■□□□□ 0.34
NPAS3-203ENST00000357798 TMEM101Q96IK0 257 aa17.2■□□□□ 0.34
NPAS3-203ENST00000357798 DAND5Q8N907 189 aa17.2■□□□□ 0.34
NPAS3-203ENST00000357798 LINC00308Q8TCZ7 52 aa17.18■□□□□ 0.34
NPAS3-203ENST00000357798 COX7A2LO14548 114 aa17.17■□□□□ 0.34
NPAS3-203ENST00000357798 IGHV3-53P01767 116 aa17.17■□□□□ 0.34
NPAS3-203ENST00000357798 SPTBN4Q9H254 2564 aa17.17■□□□□ 0.34
NPAS3-203ENST00000357798 IGHV4-30-2A0A087WSY4 118 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 IGLV5-39A0A0G2JS06 123 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 AVPP01185 164 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 COPS9Q8WXC6 57 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 PRORYQ9H606 182 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 ATRXP46100 2492 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 CCL19Q99731 98 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 IMUPQ9GZP8 106 aa17.16■□□□□ 0.34
NPAS3-203ENST00000357798 IGHV4-59P01825 116 aa17.15■□□□□ 0.34
NPAS3-203ENST00000357798 HOXD3P31249 432 aaPredicted RBP17.15■□□□□ 0.34
NPAS3-203ENST00000357798 MEIG1Q5JSS6 88 aa17.15■□□□□ 0.34
NPAS3-203ENST00000357798 FAM110AQ9BQ89 295 aa17.15■□□□□ 0.34
NPAS3-203ENST00000357798 DUX5Q96PT3 197 aa17.14■□□□□ 0.33
NPAS3-203ENST00000357798 CELSR1Q9NYQ6 3014 aa17.14■□□□□ 0.33
NPAS3-203ENST00000357798 RBMY1BA6NDE4 496 aaKnown RBP17.14■□□□□ 0.33
NPAS3-203ENST00000357798 RBMY1EA6NEQ0 496 aaKnown RBP17.14■□□□□ 0.33
NPAS3-203ENST00000357798 RBMY1DP0C7P1 496 aaKnown RBP17.14■□□□□ 0.33
NPAS3-203ENST00000357798 DEFB131AP59861 70 aa17.14■□□□□ 0.33
NPAS3-203ENST00000357798 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.14■□□□□ 0.33
NPAS3-203ENST00000357798 IGHV3-38A0A0C4DH36 116 aa17.13■□□□□ 0.33
NPAS3-203ENST00000357798 Q9H8V8 135 aa17.13■□□□□ 0.33
NPAS3-203ENST00000357798 HERVK_113P63121 156 aa17.13■□□□□ 0.33
NPAS3-203ENST00000357798 SHISA2Q6UWI4 295 aa17.12■□□□□ 0.33
NPAS3-203ENST00000357798 DGAT2L7PQ6IED9 249 aa17.12■□□□□ 0.33
NPAS3-203ENST00000357798 CHCHD5Q9BSY4 110 aa17.12■□□□□ 0.33
NPAS3-203ENST00000357798 PRM2P04554 102 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 BEAN1Q3B7T3 259 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 COX6A2Q02221 97 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 DEFB112Q30KQ8 113 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 IGHV3OR16-12A0A075B7B8 117 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 ATP5J2P56134 94 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 FAM19A3Q7Z5A8 133 aa17.11■□□□□ 0.33
NPAS3-203ENST00000357798 B4DSR2 109 aa17.1■□□□□ 0.33
NPAS3-203ENST00000357798 C11orf72Q8NBR9 251 aa17.1■□□□□ 0.33
NPAS3-203ENST00000357798 RS1O15537 224 aa17.1■□□□□ 0.33
NPAS3-203ENST00000357798 TRACP01848 142 aa17.09■□□□□ 0.33
NPAS3-203ENST00000357798 LINC00242Q5T6M2 205 aa17.09■□□□□ 0.33
NPAS3-203ENST00000357798 SMIM20Q8N5G0 67 aa17.09■□□□□ 0.33
NPAS3-203ENST00000357798 UBE2E2Q96LR5 201 aa17.09■□□□□ 0.33
NPAS3-203ENST00000357798 SORL1Q92673 2214 aa17.08■□□□□ 0.33
NPAS3-203ENST00000357798 SOSTDC1Q6X4U4 206 aa17.08■□□□□ 0.32
NPAS3-203ENST00000357798 LINC00643Q86TS7 51 aa17.07■□□□□ 0.32
NPAS3-203ENST00000357798 TMEM126AQ9H061 195 aa17.06■□□□□ 0.32
NPAS3-203ENST00000357798 PPDPFQ9H3Y8 114 aa17.06■□□□□ 0.32
NPAS3-203ENST00000357798 IGF2RP11717 2491 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms