RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 Q8N3U1 123 aa17.36■□□□□ 0.37
SSBP3-202ENST00000357475 IGHV1-24A0A0C4DH33 117 aa17.35■□□□□ 0.37
SSBP3-202ENST00000357475 AMTP48728 403 aa17.35■□□□□ 0.37
SSBP3-202ENST00000357475 KIR2DL4Q99706 377 aa17.35■□□□□ 0.37
SSBP3-202ENST00000357475 TRBV25-1A0A075B6N4 114 aa17.34■□□□□ 0.37
SSBP3-202ENST00000357475 FCER1GP30273 86 aa17.34■□□□□ 0.37
SSBP3-202ENST00000357475 PRSS3P2Q8NHM4 247 aa17.34■□□□□ 0.37
SSBP3-202ENST00000357475 NXT2Q9NPJ8 142 aaKnown RBP17.33■□□□□ 0.37
SSBP3-202ENST00000357475 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-202ENST00000357475 IGKV2-29A2NJV5 120 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-202ENST00000357475 ESDP10768 282 aa17.32■□□□□ 0.36
SSBP3-202ENST00000357475 TMEM97Q5BJF2 176 aa17.32■□□□□ 0.36
SSBP3-202ENST00000357475 LGALS9CQ6DKI2 356 aa17.32■□□□□ 0.36
SSBP3-202ENST00000357475 LINC00476Q8WZB0 136 aa17.32■□□□□ 0.36
SSBP3-202ENST00000357475 UPK3BQ9BT76 320 aa17.32■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BKO60814 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 LY6G6CO95867 125 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BJP06899 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BOP23527 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BBP33778 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BDP58876 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BCP62807 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST2H2BEQ16778 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BHQ93079 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BNQ99877 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HIST1H2BMQ99879 126 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 CHCHD5Q9BSY4 110 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 TMEM243Q9BU79 118 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 HYDINQ4G0P3 5121 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 GAGE6Q13070 117 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 NIT1Q86X76 327 aa17.31■□□□□ 0.36
SSBP3-202ENST00000357475 TRAV8-6A0A0B4J262 113 aa17.3■□□□□ 0.36
SSBP3-202ENST00000357475 LINC01546A6NGU7 62 aa17.28■□□□□ 0.36
SSBP3-202ENST00000357475 Q0VG73 95 aa17.28■□□□□ 0.36
SSBP3-202ENST00000357475 FA2HQ7L5A8 372 aa17.28■□□□□ 0.36
SSBP3-202ENST00000357475 KMT2AQ03164 3969 aa17.28■□□□□ 0.36
SSBP3-202ENST00000357475 KMT2CQ8NEZ4 4911 aaKnown RBP17.28■□□□□ 0.36
SSBP3-202ENST00000357475 LINC00310P59036 64 aa17.27■□□□□ 0.36
SSBP3-202ENST00000357475 RPL39P62891 51 aaKnown RBP17.27■□□□□ 0.36
SSBP3-202ENST00000357475 LAGE3Q14657 143 aa17.27■□□□□ 0.36
SSBP3-202ENST00000357475 RNASEKQ6P5S7 137 aaKnown RBP17.27■□□□□ 0.36
SSBP3-202ENST00000357475 Q9H8V8 135 aa17.27■□□□□ 0.36
SSBP3-202ENST00000357475 LINC00614P0C842 121 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 C20orf203Q8NBC4 194 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 C1orf196B1AJZ1 125 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 TMEM262E9PQX1 116 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 SIVA1O15304 175 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 IGHV3-30P01768 117 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 IGHV3-33P01772 117 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 IGHV3-30-3P0DP02 117 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 IGHV3-30-5P0DP03 117 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 MPV17L2Q567V2 206 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 BAGE3Q86Y29 109 aa17.26■□□□□ 0.35
SSBP3-202ENST00000357475 Q8N976 141 aa17.25■□□□□ 0.35
SSBP3-202ENST00000357475 DNAH6Q9C0G6 4158 aa17.24■□□□□ 0.35
SSBP3-202ENST00000357475 NUPR1O60356 82 aa17.24■□□□□ 0.35
SSBP3-202ENST00000357475 PMCHL1Q16048 86 aa17.24■□□□□ 0.35
SSBP3-202ENST00000357475 UBE2L6O14933 153 aa17.23■□□□□ 0.35
SSBP3-202ENST00000357475 AP5S1Q9NUS5 200 aa17.23■□□□□ 0.35
SSBP3-202ENST00000357475 K7EMI3 77 aa17.22■□□□□ 0.35
SSBP3-202ENST00000357475 SERF1AO75920 110 aa17.22■□□□□ 0.35
SSBP3-202ENST00000357475 DNAH10OSP0CZ25 163 aa17.22■□□□□ 0.35
SSBP3-202ENST00000357475 ORMDL2Q53FV1 153 aa17.22■□□□□ 0.35
SSBP3-202ENST00000357475 IGLV4-60A0A075B6I1 120 aa17.21■□□□□ 0.35
SSBP3-202ENST00000357475 FGF6P10767 208 aa17.21■□□□□ 0.35
SSBP3-202ENST00000357475 RBX1P62877 108 aa17.21■□□□□ 0.35
SSBP3-202ENST00000357475 A0A096LNJ9 63 aa17.21■□□□□ 0.34
SSBP3-202ENST00000357475 BTF3P20290 206 aaKnown RBP17.21■□□□□ 0.34
SSBP3-202ENST00000357475 LINC01556Q5JQF7 62 aa17.21■□□□□ 0.34
SSBP3-202ENST00000357475 KRTAP1-5Q9BYS1 174 aa17.21■□□□□ 0.34
SSBP3-202ENST00000357475 RAB5BP61020 215 aa17.2■□□□□ 0.34
SSBP3-202ENST00000357475 UBE2D4Q9Y2X8 147 aa17.2■□□□□ 0.34
SSBP3-202ENST00000357475 A0A087WX48 190 aa17.19■□□□□ 0.34
SSBP3-202ENST00000357475 C2orf66Q6UXQ4 117 aa17.19■□□□□ 0.34
SSBP3-202ENST00000357475 LCE6AA0A183 80 aa17.18■□□□□ 0.34
SSBP3-202ENST00000357475 CHCHD1Q96BP2 118 aaKnown RBP17.18■□□□□ 0.34
SSBP3-202ENST00000357475 H7C423 109 aa17.17■□□□□ 0.34
SSBP3-202ENST00000357475 FAM104AQ969W3 186 aa17.17■□□□□ 0.34
SSBP3-202ENST00000357475 RYR2Q92736 4967 aa17.17■□□□□ 0.34
SSBP3-202ENST00000357475 M0R2N4 97 aa17.16■□□□□ 0.34
SSBP3-202ENST00000357475 NDUFA6P56556 154 aa17.16■□□□□ 0.34
SSBP3-202ENST00000357475 AMMECR1LQ6DCA0 310 aa17.16■□□□□ 0.34
SSBP3-202ENST00000357475 MRPL52Q86TS9 123 aaKnown RBP17.16■□□□□ 0.34
SSBP3-202ENST00000357475 FAM19A2Q8N3H0 131 aa17.16■□□□□ 0.34
SSBP3-202ENST00000357475 OPRPNQ99935 248 aaPredicted RBP17.16■□□□□ 0.34
SSBP3-202ENST00000357475 TOMM6Q96B49 74 aa17.16■□□□□ 0.34
SSBP3-202ENST00000357475 CYSLTR1Q9Y271 337 aa17.16■□□□□ 0.34
SSBP3-202ENST00000357475 KLK12Q9UKR0 248 aa17.15■□□□□ 0.34
SSBP3-202ENST00000357475 A0A1B0GUV1 79 aa17.14■□□□□ 0.33
SSBP3-202ENST00000357475 RNASE13Q5GAN3 156 aaKnown RBP17.14■□□□□ 0.33
SSBP3-202ENST00000357475 TMEM18Q96B42 140 aa17.14■□□□□ 0.33
SSBP3-202ENST00000357475 NBDYA0A0U1RRE5 68 aa17.13■□□□□ 0.33
SSBP3-202ENST00000357475 HSBP1O75506 76 aa17.13■□□□□ 0.33
SSBP3-202ENST00000357475 ANGP03950 147 aaKnown RBP17.13■□□□□ 0.33
SSBP3-202ENST00000357475 CLPSL2Q6UWE3 100 aa17.13■□□□□ 0.33
SSBP3-202ENST00000357475 DNAH2Q9P225 4427 aa17.13■□□□□ 0.33
SSBP3-202ENST00000357475 PKIAP61925 76 aa17.12■□□□□ 0.33
SSBP3-202ENST00000357475 Q6ZUT4 128 aa17.12■□□□□ 0.33
SSBP3-202ENST00000357475 DNAH10Q8IVF4 4471 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms