RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 CIRBPQ14011 172 aaKnown RBP6.53□□□□□ -1.36
LINC01560-201ENST00000357412 RASL11AQ6T310 242 aa6.52□□□□□ -1.37
LINC01560-201ENST00000357412 LYZL1Q6UWQ5 148 aa6.52□□□□□ -1.37
LINC01560-201ENST00000357412 SMIM12Q96EX1 92 aa6.52□□□□□ -1.37
LINC01560-201ENST00000357412 PGLYRP4Q96LB8 373 aa6.52□□□□□ -1.37
LINC01560-201ENST00000357412 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
LINC01560-201ENST00000357412 TRBV20OR9-2A0A075B6H5 130 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 hDV102S1A0JD36 115 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 F2Z2F3 143 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 NTF3P20783 257 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 GNG4P50150 75 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 RAB5CP51148 216 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 C9orf62Q8N4C0 152 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
LINC01560-201ENST00000357412 XKRY2A2RUG3 117 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 IFNA1P01562 189 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 TRGC1P0CF51 173 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 CHTF8P0CG12 524 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 WDR73Q6P4I2 378 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 CNFNQ9BYD5 112 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 MED9Q9NWA0 146 aa6.5□□□□□ -1.37
LINC01560-201ENST00000357412 IGHV3-64A0A075B6Q5 118 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 A0A087WYN8 130 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 PDE6DO43924 150 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 CTRLP40313 264 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 SULT1A2P50226 295 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 MEF2BQ02080 365 aaPredicted RBP6.49□□□□□ -1.37
LINC01560-201ENST00000357412 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 SPACA4Q8TDM5 124 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 AP5S1Q9NUS5 200 aa6.49□□□□□ -1.37
LINC01560-201ENST00000357412 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.48□□□□□ -1.37
LINC01560-201ENST00000357412 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 BCL2P10415 239 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 AMTP48728 403 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 COTL1Q14019 142 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 EIF5AL1Q6IS14 154 aaKnown RBP6.48□□□□□ -1.37
LINC01560-201ENST00000357412 Q6ZRU5 148 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 C15orf56Q8N910 161 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 GATD1Q8NB37 220 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 RNF185Q96GF1 192 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 BIN3Q9NQY0 253 aa6.48□□□□□ -1.37
LINC01560-201ENST00000357412 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
LINC01560-201ENST00000357412 TEX46H3BTG2 121 aa6.47□□□□□ -1.37
LINC01560-201ENST00000357412 UBE2L6O14933 153 aa6.47□□□□□ -1.37
LINC01560-201ENST00000357412 TWIST1Q15672 202 aa6.47□□□□□ -1.37
LINC01560-201ENST00000357412 Q6ZNX1 250 aa6.47□□□□□ -1.37
LINC01560-201ENST00000357412 TNXBP22105 4242 aa6.46□□□□□ -1.37
LINC01560-201ENST00000357412 K7EN84 100 aa6.46□□□□□ -1.38
LINC01560-201ENST00000357412 FOXA3P55318 350 aaPredicted RBP6.46□□□□□ -1.38
LINC01560-201ENST00000357412 GTSF1Q8WW33 167 aa6.46□□□□□ -1.38
LINC01560-201ENST00000357412 DPH3Q96FX2 82 aa6.46□□□□□ -1.38
LINC01560-201ENST00000357412 RNASE7Q9H1E1 156 aaKnown RBP6.46□□□□□ -1.38
LINC01560-201ENST00000357412 RPP21Q9H633 154 aaKnown RBP6.46□□□□□ -1.38
LINC01560-201ENST00000357412 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
LINC01560-201ENST00000357412 LRP2P98164 4655 aa6.46□□□□□ -1.38
LINC01560-201ENST00000357412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.45□□□□□ -1.38
LINC01560-201ENST00000357412 IGKV3OR2-268A0A0C4DH90 116 aa6.45□□□□□ -1.38
LINC01560-201ENST00000357412 IGKV2-29A2NJV5 120 aaPredicted RBP6.45□□□□□ -1.38
LINC01560-201ENST00000357412 COX6A2Q02221 97 aa6.45□□□□□ -1.38
LINC01560-201ENST00000357412 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
LINC01560-201ENST00000357412 CFAP161Q6P656 301 aa6.45□□□□□ -1.38
LINC01560-201ENST00000357412 PRSS3P2Q8NHM4 247 aa6.45□□□□□ -1.38
LINC01560-201ENST00000357412 OCC1Q8TAD7 63 aa6.45□□□□□ -1.38
LINC01560-201ENST00000357412 CHCHD10Q8WYQ3 142 aaPredicted RBP6.45□□□□□ -1.38
LINC01560-201ENST00000357412 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
LINC01560-201ENST00000357412 PHOX2AO14813 284 aa6.44□□□□□ -1.38
LINC01560-201ENST00000357412 NCR2O95944 276 aa6.44□□□□□ -1.38
LINC01560-201ENST00000357412 TAGLN2P37802 199 aaKnown RBP6.44□□□□□ -1.38
LINC01560-201ENST00000357412 RPS10P46783 165 aaKnown RBP6.44□□□□□ -1.38
LINC01560-201ENST00000357412 SLC51BQ86UW2 128 aa6.44□□□□□ -1.38
LINC01560-201ENST00000357412 GVQW2A0A096LPI5 108 aaPredicted RBP6.43□□□□□ -1.38
LINC01560-201ENST00000357412 SDHAF1A6NFY7 115 aa6.43□□□□□ -1.38
LINC01560-201ENST00000357412 H7C423 109 aa6.43□□□□□ -1.38
LINC01560-201ENST00000357412 NDUFS6O75380 124 aaKnown RBP6.43□□□□□ -1.38
LINC01560-201ENST00000357412 FGF6P10767 208 aa6.43□□□□□ -1.38
LINC01560-201ENST00000357412 FOXI1Q12951 378 aa6.43□□□□□ -1.38
LINC01560-201ENST00000357412 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
LINC01560-201ENST00000357412 RNASEKQ6P5S7 137 aaKnown RBP6.43□□□□□ -1.38
LINC01560-201ENST00000357412 TCTE3Q8IZS6 198 aa6.43□□□□□ -1.38
LINC01560-201ENST00000357412 FAM231BA6NCW3 169 aa6.42□□□□□ -1.38
LINC01560-201ENST00000357412 GAS8-AS1O95177 125 aa6.42□□□□□ -1.38
LINC01560-201ENST00000357412 APCSP02743 223 aa6.42□□□□□ -1.38
LINC01560-201ENST00000357412 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
LINC01560-201ENST00000357412 IGKV2-24A0A0C4DH68 120 aa6.41□□□□□ -1.38
LINC01560-201ENST00000357412 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
LINC01560-201ENST00000357412 TEX261Q6UWH6 196 aa6.41□□□□□ -1.38
LINC01560-201ENST00000357412 FAM231DQ6ZW35 169 aa6.41□□□□□ -1.38
LINC01560-201ENST00000357412 SMIM15Q7Z3B0 74 aa6.41□□□□□ -1.38
LINC01560-201ENST00000357412 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
LINC01560-201ENST00000357412 RNF213Q63HN8 5207 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 A0A096LNI7 61 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 TMEM250H0YL14 139 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 I3L3M4 83 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 GATCO43716 136 aaKnown RBP6.4□□□□□ -1.38
LINC01560-201ENST00000357412 ESDP10768 282 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms