RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 FAM236CP0DP71 79 aa5.45□□□□□ -1.54
VPS13A-202ENST00000357409 SNURFQ9Y675 71 aa5.45□□□□□ -1.54
VPS13A-202ENST00000357409 PLCE1Q9P212 2302 aa5.45□□□□□ -1.54
VPS13A-202ENST00000357409 HELZP42694 1942 aaKnown RBP5.45□□□□□ -1.54
VPS13A-202ENST00000357409 GBF1Q92538 1859 aa5.45□□□□□ -1.54
VPS13A-202ENST00000357409 ARID2Q68CP9 1835 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 DNAH12Q6ZR08 3092 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 CEP350Q5VT06 3117 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 KIR2DL5BA0A0G2JN68 375 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 KIR2DL5BA0A0G2JPC4 375 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 KIR2DL5AQ8N109 375 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 TRPM7Q96QT4 1865 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 UNC80Q8N2C7 3258 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 XGP55808 180 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 SPANXA1Q9NS26 97 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 PPDPFLQ8WWR9 84 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 RBBP6Q7Z6E9 1792 aaKnown RBP5.44□□□□□ -1.54
VPS13A-202ENST00000357409 PLXNA3P51805 1871 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 NDUFV3P56181 108 aaKnown RBP5.44□□□□□ -1.54
VPS13A-202ENST00000357409 SPTBN2O15020 2390 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 MAPKAPK5-AS1Q8N8E1 139 aa5.44□□□□□ -1.54
VPS13A-202ENST00000357409 LINC01556Q5JQF7 62 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 Q6ZPA2 131 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 TRBV6-8A0A0A6YYG3 113 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 BPY2O14599 106 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 TOMM6Q96B49 74 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 CEP290O15078 2479 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 ENHOQ6UWT2 76 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 F8W1H4 67 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 INSL3P51460 131 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 A0A0B4J2C4 111 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 VWA8A3KMH1 1905 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 K7EP34 96 aa5.43□□□□□ -1.54
VPS13A-202ENST00000357409 A8MTW9 85 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 POU2AF1Q16633 256 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 RLFQ13129 1914 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 K7EMT4 169 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 CELA1Q9UNI1 258 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 SYCNQ0VAF6 134 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 RNASE8Q8TDE3 154 aaKnown RBP5.42□□□□□ -1.54
VPS13A-202ENST00000357409 CRYGBP07316 175 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 MP68P56378 58 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 TRAV10A0A0B4J240 114 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 CT83Q5H943 113 aa5.42□□□□□ -1.54
VPS13A-202ENST00000357409 K7EQG2 157 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 BRWD1-AS2P59051 145 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 CFAP126Q5VTH2 177 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 C20orf203Q8NBC4 194 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 C20orf197Q8N268 126 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 RBX1P62877 108 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 LINC01559Q495D7 138 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 SMIM20Q8N5G0 67 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 KIF26BQ2KJY2 2108 aa5.41□□□□□ -1.54
VPS13A-202ENST00000357409 A0A0J9YXY3 114 aa5.4□□□□□ -1.54
VPS13A-202ENST00000357409 PRR9Q5T870 116 aa5.4□□□□□ -1.54
VPS13A-202ENST00000357409 C5orf42Q9H799 3197 aa5.4□□□□□ -1.54
VPS13A-202ENST00000357409 USP17L23D6RBM5 183 aa5.4□□□□□ -1.54
VPS13A-202ENST00000357409 PLA2G1BP04054 148 aaKnown RBP5.4□□□□□ -1.54
VPS13A-202ENST00000357409 IL17DQ8TAD2 202 aa5.4□□□□□ -1.54
VPS13A-202ENST00000357409 FNDC1Q4ZHG4 1894 aaPredicted RBP5.4□□□□□ -1.54
VPS13A-202ENST00000357409 RALGAPA2Q2PPJ7 1873 aa5.4□□□□□ -1.55
VPS13A-202ENST00000357409 A0A1W2PPR1 153 aa5.4□□□□□ -1.55
VPS13A-202ENST00000357409 PCOTHQ58A44 107 aa5.4□□□□□ -1.55
VPS13A-202ENST00000357409 TCL1BO95988 128 aa5.4□□□□□ -1.55
VPS13A-202ENST00000357409 SPATA12Q7Z6I5 190 aa5.4□□□□□ -1.55
VPS13A-202ENST00000357409 MAP1BP46821 2468 aaKnown RBP5.39□□□□□ -1.55
VPS13A-202ENST00000357409 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 UPK3BQ9BT76 320 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 E9PLD3 99 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 COX6A2Q02221 97 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 SPTBN1Q01082 2364 aaKnown RBP5.39□□□□□ -1.55
VPS13A-202ENST00000357409 IGLV4-3A0A075B6K6 122 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 C1orf137Q5JT78 98 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 C11orf71Q6IPW1 123 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 TMEM258P61165 79 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 CCKP06307 115 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 Q6ZVQ6 151 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 ZNF580Q9UK33 172 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 ZGRF1Q86YA3 2104 aa5.39□□□□□ -1.55
VPS13A-202ENST00000357409 Q9UF83 564 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 LINC00959A0A1B0GUT2 108 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 MED14OSP0DP75 135 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 EML6Q6ZMW3 1958 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 M0QXV9 152 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 ODF1Q14990 250 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 DNAH14Q0VDD8 3507 aa5.38□□□□□ -1.55
VPS13A-202ENST00000357409 NOTCH4Q99466 2003 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 ARHGAP21Q5T5U3 1957 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 LINC00242Q5T6M2 205 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 MIFP14174 115 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 CXCL5P42830 114 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 Q6ZQY7 126 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 SBF1O95248 1867 aa5.37□□□□□ -1.55
VPS13A-202ENST00000357409 IL15RAQ13261 267 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms