RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ELANEP08246 267 aa5.09□□□□□ -1.59
RTN4-203ENST00000357376 TSPEAR-AS2P59090 65 aa5.09□□□□□ -1.59
RTN4-203ENST00000357376 ZNF22P17026 224 aaPredicted RBP5.08□□□□□ -1.6
RTN4-203ENST00000357376 COPS9Q8WXC6 57 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 CARD19Q96LW7 228 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 MTORP42345 2549 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 LINC00158P58513 81 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 LINC01620Q4KN68 170 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 TMEM61Q8N0U2 210 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 DCANP1Q8TF63 244 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 Q9H8V8 135 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 IGLV4-3A0A075B6K6 122 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 TRBV27A0A0K0K1C4 114 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 K7EQG2 157 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 CFAP126Q5VTH2 177 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 CLEC2BQ92478 149 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 IGLV4-69A0A075B6H9 119 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 LGALS9O00182 355 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 IGHV3-30P01768 117 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 IGHV3-30-5P0DP03 117 aa5.08□□□□□ -1.6
RTN4-203ENST00000357376 FN1P02751 2386 aaKnown RBP5.07□□□□□ -1.6
RTN4-203ENST00000357376 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 SOCS3O14543 225 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 PRB1P04280 392 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 SCGB1A1P11684 91 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 Q6ZUT4 128 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 ZNF580Q9UK33 172 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 CRYGDP07320 174 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 CRYBA4P53673 196 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 JMJD1CQ15652 2540 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 TRAV26-1A0A087WT03 109 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 TMEM223A0PJW6 202 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 GAGE7O76087 117 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 GAGE12FP0CL80 117 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 GAGE12GP0CL81 117 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 GAGE12IP0CL82 117 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 ICOSQ9Y6W8 199 aa5.07□□□□□ -1.6
RTN4-203ENST00000357376 TSHBP01222 138 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 NSUN5P1Q3KNT7 163 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 C15orf53Q8NAA6 179 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 PRRC2AP48634 2157 aaKnown RBP5.06□□□□□ -1.6
RTN4-203ENST00000357376 ZNF462Q96JM2 2506 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 Q96MF0 132 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 TEX49A0A1B0GTD5 131 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 LINC01546A6NGU7 62 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 IGLV1-40P01703 118 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 CRPP02741 224 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 DEFB130BP0DP73 79 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 DEFB130AP0DP74 79 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 PSMB8P28062 276 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 NFE4Q86UQ8 179 aa5.06□□□□□ -1.6
RTN4-203ENST00000357376 IGHV1-58A0A0C4DH39 117 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 IGHV3-33P01772 117 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 PFN2P35080 140 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 UBE2D1P51668 147 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 GAGE6Q13070 117 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 C18orf65Q6ZTR6 163 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 ATP6V0E2Q8NHE4 81 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 SPANXA1Q9NS26 97 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 HIVEP2P31629 2446 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 B5MCH6 92 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 PAX4O43316 350 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 LINC00467Q9BRT7 94 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 NOP10Q9NPE3 64 aaKnown RBP5.05□□□□□ -1.6
RTN4-203ENST00000357376 XGP55808 180 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 C9orf85Q96MD7 179 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 SPATA25Q9BR10 227 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 CDKN2A-AS1Q9UH64 79 aa5.05□□□□□ -1.6
RTN4-203ENST00000357376 TRBV6-5A0A0K0K1A5 114 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 TRIAP1O43715 76 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 ANKRD17O75179 2603 aaKnown RBP5.04□□□□□ -1.6
RTN4-203ENST00000357376 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
RTN4-203ENST00000357376 DOPEY1Q5JWR5 2465 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 J3QLI3 93 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 PF4P02776 101 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 HERVK_113P63121 156 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 SMG1Q96Q15 3661 aaKnown RBP5.04□□□□□ -1.6
RTN4-203ENST00000357376 GAGE2AQ6NT46 116 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 Q6ZSV7 163 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 CLUHP3Q96NS8 147 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 KIF25-AS1Q9Y6Z4 181 aa5.04□□□□□ -1.6
RTN4-203ENST00000357376 A0A0B4J2C4 111 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 IFITM1P13164 125 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 HTN3P15516 51 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 RPL32P62910 135 aaKnown RBP5.03□□□□□ -1.6
RTN4-203ENST00000357376 ZNF575Q86XF7 245 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 RNF183Q96D59 192 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 VSIG2Q96IQ7 327 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 TMEM243Q9BU79 118 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 TRBV10-2A0A0K0K1G8 114 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 LINC00315P59091 139 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 C6orf226Q5I0X4 101 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 ODF3Q96PU9 254 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 MAP6D1Q9H9H5 199 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 A0A096LPF7 62 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 RS1O15537 224 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
RTN4-203ENST00000357376 RELNP78509 3460 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms