RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 ENHOQ6UWT2 76 aa12.14□□□□□ -0.47
RXRA-201ENST00000356384 WNK1Q9H4A3 2382 aa12.14□□□□□ -0.47
RXRA-201ENST00000356384 NCKAP5O14513 1909 aa12.14□□□□□ -0.47
RXRA-201ENST00000356384 IGKV1D-37A0A075B6S9 117 aa12.14□□□□□ -0.47
RXRA-201ENST00000356384 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
RXRA-201ENST00000356384 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 CRYGDP07320 174 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 MT-ATP8P03928 68 aa12.13□□□□□ -0.47
RXRA-201ENST00000356384 NDUFV3P56181 108 aaKnown RBP12.13□□□□□ -0.47
RXRA-201ENST00000356384 PLXND1Q9Y4D7 1925 aa12.12□□□□□ -0.47
RXRA-201ENST00000356384 MRPL55Q7Z7F7 128 aaKnown RBP12.12□□□□□ -0.47
RXRA-201ENST00000356384 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
RXRA-201ENST00000356384 A0A0U1RQV1 116 aa12.11□□□□□ -0.47
RXRA-201ENST00000356384 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
RXRA-201ENST00000356384 CDKN2A-AS1Q9UH64 79 aa12.11□□□□□ -0.47
RXRA-201ENST00000356384 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
RXRA-201ENST00000356384 FAM19A5Q7Z5A7 132 aaPredicted RBP12.11□□□□□ -0.47
RXRA-201ENST00000356384 LINC00322Q6ZN03 302 aaPredicted RBP12.11□□□□□ -0.47
RXRA-201ENST00000356384 TNRC6AQ8NDV7 1962 aaKnown RBP12.1□□□□□ -0.47
RXRA-201ENST00000356384 KIR2DL5BQ8NHK3 375 aa12.1□□□□□ -0.47
RXRA-201ENST00000356384 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
RXRA-201ENST00000356384 WISP2O76076 250 aa12.1□□□□□ -0.47
RXRA-201ENST00000356384 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
RXRA-201ENST00000356384 SPG11Q96JI7 2443 aa12.09□□□□□ -0.47
RXRA-201ENST00000356384 UQCRQO14949 82 aa12.09□□□□□ -0.47
RXRA-201ENST00000356384 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
RXRA-201ENST00000356384 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
RXRA-201ENST00000356384 SONP18583 2426 aaKnown RBP12.09□□□□□ -0.47
RXRA-201ENST00000356384 PLXNB3Q9ULL4 1909 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 DEFB131BA0A096LNP1 70 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 MSMPQ1L6U9 139 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 DCANP1Q8TF63 244 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.08□□□□□ -0.48
RXRA-201ENST00000356384 C1orf158Q8N1D5 194 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 DSCAML1Q8TD84 2053 aa12.08□□□□□ -0.48
RXRA-201ENST00000356384 PLA2G5P39877 138 aa12.07□□□□□ -0.48
RXRA-201ENST00000356384 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
RXRA-201ENST00000356384 NEXN-AS1Q8NBZ9 246 aa12.07□□□□□ -0.48
RXRA-201ENST00000356384 DENND4CQ5VZ89 1909 aa12.07□□□□□ -0.48
RXRA-201ENST00000356384 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
RXRA-201ENST00000356384 A0A1W2PNU3 283 aaPredicted RBP12.06□□□□□ -0.48
RXRA-201ENST00000356384 HIVEP2P31629 2446 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 PTPN13Q12923 2485 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 OTOGLQ3ZCN5 2332 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 ACACBO00763 2458 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 ZNF22P17026 224 aaPredicted RBP12.06□□□□□ -0.48
RXRA-201ENST00000356384 COL4A3Q01955 1670 aa12.06□□□□□ -0.48
RXRA-201ENST00000356384 CUL9Q8IWT3 2517 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 C3orf84H3BNL1 204 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 TNFRSF13BO14836 293 aaPredicted RBP12.05□□□□□ -0.48
RXRA-201ENST00000356384 IGF1P05019 195 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 IGLV4-3A0A075B6K6 122 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 CCKP06307 115 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 HILS1P60008 231 aa12.05□□□□□ -0.48
RXRA-201ENST00000356384 ATP5EP2Q5VTU8 51 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 TP73-AS1Q9UF72 201 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 OBSL1O75147 1896 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 TRIAP1O43715 76 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
RXRA-201ENST00000356384 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
RXRA-201ENST00000356384 PRR15LQ9BU68 103 aa12.03□□□□□ -0.48
RXRA-201ENST00000356384 SPANXB1Q9NS25 103 aaPredicted RBP12.03□□□□□ -0.48
RXRA-201ENST00000356384 H7C423 109 aa12.03□□□□□ -0.48
RXRA-201ENST00000356384 C6orf99Q4VX62 202 aa12.03□□□□□ -0.48
RXRA-201ENST00000356384 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
RXRA-201ENST00000356384 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.48
RXRA-201ENST00000356384 DEFB114Q30KQ6 69 aa12.02□□□□□ -0.48
RXRA-201ENST00000356384 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.48
RXRA-201ENST00000356384 K7EQG2 157 aa12.02□□□□□ -0.49
RXRA-201ENST00000356384 COL4A4P53420 1690 aaPredicted RBP12.02□□□□□ -0.49
RXRA-201ENST00000356384 C11orf1Q9H5F2 150 aa12.02□□□□□ -0.49
RXRA-201ENST00000356384 IGKV2-28A0A075B6P5 120 aa12.01□□□□□ -0.49
RXRA-201ENST00000356384 ODF3BA8MYP8 253 aa12.01□□□□□ -0.49
RXRA-201ENST00000356384 IGKV2D-28P01615 120 aa12.01□□□□□ -0.49
RXRA-201ENST00000356384 INAFM1C9JVW0 142 aa12.01□□□□□ -0.49
RXRA-201ENST00000356384 LINC00482Q8N8I6 264 aa12.01□□□□□ -0.49
RXRA-201ENST00000356384 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
RXRA-201ENST00000356384 C19orf84I3L1E1 186 aa12□□□□□ -0.49
RXRA-201ENST00000356384 WFDC13Q8IUB5 93 aa12□□□□□ -0.49
RXRA-201ENST00000356384 Q8N976 141 aa12□□□□□ -0.49
RXRA-201ENST00000356384 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
RXRA-201ENST00000356384 SYCNQ0VAF6 134 aa12□□□□□ -0.49
RXRA-201ENST00000356384 MAPKAPK5-AS1Q8N8E1 139 aa12□□□□□ -0.49
RXRA-201ENST00000356384 LMO4P61968 165 aa12□□□□□ -0.49
RXRA-201ENST00000356384 CFAP126Q5VTH2 177 aa12□□□□□ -0.49
RXRA-201ENST00000356384 SNURFQ9Y675 71 aa12□□□□□ -0.49
RXRA-201ENST00000356384 PROK1P58294 105 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms