RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 CHCHD5Q9BSY4 110 aa11.21□□□□□ -0.62
VAT1-201ENST00000355653 BRI3O95415 125 aa11.2□□□□□ -0.62
VAT1-201ENST00000355653 MEIG1Q5JSS6 88 aa11.2□□□□□ -0.62
VAT1-201ENST00000355653 CREBBPQ92793 2442 aa11.2□□□□□ -0.62
VAT1-201ENST00000355653 NCOR2Q9Y618 2525 aa11.2□□□□□ -0.62
VAT1-201ENST00000355653 H3BT86 120 aa11.2□□□□□ -0.62
VAT1-201ENST00000355653 MRPS36P82909 103 aaKnown RBP11.2□□□□□ -0.62
VAT1-201ENST00000355653 FAM104AQ969W3 186 aa11.2□□□□□ -0.62
VAT1-201ENST00000355653 DOPEY2Q9Y3R5 2298 aa11.19□□□□□ -0.62
VAT1-201ENST00000355653 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
VAT1-201ENST00000355653 SNRPD3P62318 126 aaKnown RBP11.19□□□□□ -0.62
VAT1-201ENST00000355653 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
VAT1-201ENST00000355653 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
VAT1-201ENST00000355653 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
VAT1-201ENST00000355653 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 H3BUA1 57 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 LST1O00453 97 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 Q9UF83 564 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 LY6DQ14210 128 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 TMEM61Q8N0U2 210 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
VAT1-201ENST00000355653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.17□□□□□ -0.62
VAT1-201ENST00000355653 IGKV2-29A2NJV5 120 aaPredicted RBP11.17□□□□□ -0.62
VAT1-201ENST00000355653 PRM2P04554 102 aa11.17□□□□□ -0.62
VAT1-201ENST00000355653 FAM110AQ9BQ89 295 aa11.17□□□□□ -0.62
VAT1-201ENST00000355653 TNFRSF18Q9Y5U5 241 aa11.17□□□□□ -0.62
VAT1-201ENST00000355653 A0A0U1RRA0 63 aa11.17□□□□□ -0.62
VAT1-201ENST00000355653 PYGO1Q9Y3Y4 419 aa11.16□□□□□ -0.62
VAT1-201ENST00000355653 CELSR2Q9HCU4 2923 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 C19orf84I3L1E1 186 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 K7EMT4 169 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 UCNP55089 124 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.62
VAT1-201ENST00000355653 DUX5Q96PT3 197 aa11.15□□□□□ -0.62
VAT1-201ENST00000355653 IGHV3-38A0A0C4DH36 116 aa11.15□□□□□ -0.63
VAT1-201ENST00000355653 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.63
VAT1-201ENST00000355653 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
VAT1-201ENST00000355653 A6NDX4 124 aa11.14□□□□□ -0.63
VAT1-201ENST00000355653 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
VAT1-201ENST00000355653 CSMD2Q7Z408 3487 aa11.13□□□□□ -0.63
VAT1-201ENST00000355653 SPG11Q96JI7 2443 aa11.13□□□□□ -0.63
VAT1-201ENST00000355653 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
VAT1-201ENST00000355653 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
VAT1-201ENST00000355653 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
VAT1-201ENST00000355653 MRPL23Q16540 153 aaKnown RBP11.13□□□□□ -0.63
VAT1-201ENST00000355653 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
VAT1-201ENST00000355653 CUBNO60494 3623 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 FAM240AA0A1B0GVK7 77 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 UBE2D4Q9Y2X8 147 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 IGHV4-61A0A0C4DH41 118 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 K7EQG2 157 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 Q6ZSN1 163 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
VAT1-201ENST00000355653 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
VAT1-201ENST00000355653 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
VAT1-201ENST00000355653 CHCHD7Q9BUK0 85 aa11.11□□□□□ -0.63
VAT1-201ENST00000355653 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
VAT1-201ENST00000355653 CITED2Q99967 270 aaPredicted RBP11.1□□□□□ -0.63
VAT1-201ENST00000355653 DEFB121Q5J5C9 76 aa11.09□□□□□ -0.63
VAT1-201ENST00000355653 SPANXA1Q9NS26 97 aa11.09□□□□□ -0.63
VAT1-201ENST00000355653 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
VAT1-201ENST00000355653 CFHR3Q02985 330 aa11.08□□□□□ -0.64
VAT1-201ENST00000355653 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
VAT1-201ENST00000355653 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
VAT1-201ENST00000355653 Q9H8V8 135 aa11.08□□□□□ -0.64
VAT1-201ENST00000355653 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
VAT1-201ENST00000355653 LINC00308Q8TCZ7 52 aa11.08□□□□□ -0.64
VAT1-201ENST00000355653 NDUFA1O15239 70 aa11.07□□□□□ -0.64
VAT1-201ENST00000355653 PSMB8P28062 276 aa11.07□□□□□ -0.64
VAT1-201ENST00000355653 COX6A2Q02221 97 aa11.07□□□□□ -0.64
VAT1-201ENST00000355653 Q8N2B8 174 aa11.06□□□□□ -0.64
VAT1-201ENST00000355653 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
VAT1-201ENST00000355653 TIMM17BO60830 172 aa11.06□□□□□ -0.64
VAT1-201ENST00000355653 GNLYP22749 145 aa11.06□□□□□ -0.64
VAT1-201ENST00000355653 LINC01587Q99440 93 aa11.05□□□□□ -0.64
VAT1-201ENST00000355653 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
VAT1-201ENST00000355653 COX7A2LO14548 114 aa11.05□□□□□ -0.64
VAT1-201ENST00000355653 DAZ2Q13117 558 aaKnown RBP11.04□□□□□ -0.64
VAT1-201ENST00000355653 DAZ4Q86SG3 579 aaKnown RBP11.04□□□□□ -0.64
VAT1-201ENST00000355653 DAZ3Q9NR90 486 aaKnown RBP11.04□□□□□ -0.64
VAT1-201ENST00000355653 ITPR1Q14643 2758 aa11.04□□□□□ -0.64
VAT1-201ENST00000355653 DEFB131AP59861 70 aa11.04□□□□□ -0.64
VAT1-201ENST00000355653 NDUFA7O95182 113 aa11.03□□□□□ -0.64
VAT1-201ENST00000355653 EDA2RQ9HAV5 297 aa11.03□□□□□ -0.64
VAT1-201ENST00000355653 IGHV4-59P01825 116 aa11.02□□□□□ -0.64
VAT1-201ENST00000355653 ACYP1P07311 99 aa11.02□□□□□ -0.64
VAT1-201ENST00000355653 SOSTDC1Q6X4U4 206 aa11.02□□□□□ -0.64
VAT1-201ENST00000355653 AVPP01185 164 aa11.02□□□□□ -0.65
VAT1-201ENST00000355653 TRAV13-1A0A0B4J241 112 aa11.01□□□□□ -0.65
VAT1-201ENST00000355653 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
VAT1-201ENST00000355653 C9orf153Q5TBE3 101 aa11.01□□□□□ -0.65
VAT1-201ENST00000355653 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
VAT1-201ENST00000355653 HOXD3P31249 432 aaPredicted RBP11.01□□□□□ -0.65
VAT1-201ENST00000355653 PRIMA1Q86XR5 153 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms