RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.87
HOXA1-202ENST00000355633 DEFB104AQ8WTQ1 72 aa9.65□□□□□ -0.87
HOXA1-202ENST00000355633 TEX48A0A1B0GUV7 120 aa9.64□□□□□ -0.87
HOXA1-202ENST00000355633 C3orf79P0CE67 100 aa9.64□□□□□ -0.87
HOXA1-202ENST00000355633 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
HOXA1-202ENST00000355633 ZNRF2Q8NHG8 242 aa9.64□□□□□ -0.87
HOXA1-202ENST00000355633 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
HOXA1-202ENST00000355633 NBEAL2Q6ZNJ1 2754 aa9.64□□□□□ -0.87
HOXA1-202ENST00000355633 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
HOXA1-202ENST00000355633 RHOHQ15669 191 aa9.63□□□□□ -0.87
HOXA1-202ENST00000355633 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
HOXA1-202ENST00000355633 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
HOXA1-202ENST00000355633 PRADC1Q9BSG0 188 aa9.63□□□□□ -0.87
HOXA1-202ENST00000355633 C11orf68Q9H3H3 251 aaKnown RBP9.63□□□□□ -0.87
HOXA1-202ENST00000355633 NOTCH1P46531 2555 aa9.62□□□□□ -0.87
HOXA1-202ENST00000355633 TSHBP01222 138 aa9.62□□□□□ -0.87
HOXA1-202ENST00000355633 HHLA3Q9XRX5 114 aa9.62□□□□□ -0.87
HOXA1-202ENST00000355633 GAGE12JA6NER3 117 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 ATP5G1P05496 136 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 GAGE4Q13068 117 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 GAGE5Q13069 117 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 ORAOV1Q8WV07 137 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
HOXA1-202ENST00000355633 TM2D3Q9BRN9 247 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 SCGB1D1O95968 90 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 C2orf66Q6UXQ4 117 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 TOMM6Q96B49 74 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
HOXA1-202ENST00000355633 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 PRO0255Q9UI72 69 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 SYS1-DBNDD2H3BUS1 97 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 CRYBA4P53673 196 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 UBE2D3P61077 147 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 UBE2D2P62837 147 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 CYSLTR1Q9Y271 337 aa9.6□□□□□ -0.87
HOXA1-202ENST00000355633 A0A0J9YWU9 116 aa9.59□□□□□ -0.87
HOXA1-202ENST00000355633 A6NJY4 79 aa9.59□□□□□ -0.87
HOXA1-202ENST00000355633 ATP5LO75964 103 aa9.59□□□□□ -0.87
HOXA1-202ENST00000355633 PTTG1IPP53801 180 aa9.59□□□□□ -0.87
HOXA1-202ENST00000355633 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
HOXA1-202ENST00000355633 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
HOXA1-202ENST00000355633 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 H0Y8G0 127 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 C12orf74Q32Q52 190 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 Q8N976 141 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 SCGB3A1Q96QR1 104 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 NBEAL1Q6ZS30 2694 aa9.58□□□□□ -0.88
HOXA1-202ENST00000355633 F5H768 121 aa9.57□□□□□ -0.88
HOXA1-202ENST00000355633 PAX4O43316 350 aa9.57□□□□□ -0.88
HOXA1-202ENST00000355633 HTN3P15516 51 aa9.57□□□□□ -0.88
HOXA1-202ENST00000355633 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
HOXA1-202ENST00000355633 PET117Q6UWS5 81 aa9.57□□□□□ -0.88
HOXA1-202ENST00000355633 C20orf203Q8NBC4 194 aa9.57□□□□□ -0.88
HOXA1-202ENST00000355633 ZMAT4Q9H898 229 aa9.57□□□□□ -0.88
HOXA1-202ENST00000355633 GYPEP15421 78 aa9.56□□□□□ -0.88
HOXA1-202ENST00000355633 ERASQ7Z444 233 aa9.56□□□□□ -0.88
HOXA1-202ENST00000355633 SPATA12Q7Z6I5 190 aa9.56□□□□□ -0.88
HOXA1-202ENST00000355633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.56□□□□□ -0.88
HOXA1-202ENST00000355633 PRSS1P07477 247 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 UBE2V1Q13404 147 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 VPS25Q9BRG1 176 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 A0A0J9YY99 117 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 RNF151Q2KHN1 245 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 Q6ZN92 141 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
HOXA1-202ENST00000355633 TRAV26-1A0A087WT03 109 aa9.54□□□□□ -0.88
HOXA1-202ENST00000355633 IGIPA6NJ69 53 aa9.54□□□□□ -0.88
HOXA1-202ENST00000355633 Q6ZTC4 211 aa9.54□□□□□ -0.88
HOXA1-202ENST00000355633 C11orf45Q8TAV5 145 aa9.54□□□□□ -0.88
HOXA1-202ENST00000355633 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
HOXA1-202ENST00000355633 GTSF1LQ9H1H1 148 aa9.54□□□□□ -0.88
HOXA1-202ENST00000355633 CCL25O15444 150 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 LGALS9CQ6DKI2 356 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 PMCHL2Q9BQD1 86 aa9.53□□□□□ -0.88
HOXA1-202ENST00000355633 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.52□□□□□ -0.89
HOXA1-202ENST00000355633 IGKV2-29A2NJV5 120 aaPredicted RBP9.52□□□□□ -0.89
HOXA1-202ENST00000355633 NANOS2P60321 138 aaKnown RBP9.52□□□□□ -0.89
HOXA1-202ENST00000355633 BATFQ16520 125 aa9.52□□□□□ -0.89
HOXA1-202ENST00000355633 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
HOXA1-202ENST00000355633 ATOH7Q8N100 152 aa9.51□□□□□ -0.89
HOXA1-202ENST00000355633 BAALCQ8WXS3 180 aa9.51□□□□□ -0.89
HOXA1-202ENST00000355633 TRBV25-1A0A075B6N4 114 aa9.51□□□□□ -0.89
HOXA1-202ENST00000355633 TMEM97Q5BJF2 176 aa9.51□□□□□ -0.89
HOXA1-202ENST00000355633 PYGO1Q9Y3Y4 419 aa9.51□□□□□ -0.89
HOXA1-202ENST00000355633 A0A096LPF7 62 aa9.5□□□□□ -0.89
HOXA1-202ENST00000355633 ODF1Q14990 250 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms