RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 J3QLI3 93 aa13.26□□□□□ -0.29
PDZD3-202ENST00000355547 PTH2Q96A98 100 aa13.26□□□□□ -0.29
PDZD3-202ENST00000355547 A0A0B4J2C4 111 aa13.25□□□□□ -0.29
PDZD3-202ENST00000355547 IGHV3-33P01772 117 aa13.25□□□□□ -0.29
PDZD3-202ENST00000355547 ABCA12Q86UK0 2595 aa13.25□□□□□ -0.29
PDZD3-202ENST00000355547 A0A096LNT2 108 aa13.25□□□□□ -0.29
PDZD3-202ENST00000355547 M0R2P5 195 aa13.25□□□□□ -0.29
PDZD3-202ENST00000355547 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
PDZD3-202ENST00000355547 MAP1AP78559 2803 aaPredicted RBP13.25□□□□□ -0.29
PDZD3-202ENST00000355547 MUSTN1Q8IVN3 82 aa13.24□□□□□ -0.29
PDZD3-202ENST00000355547 A8MWV9 139 aa13.24□□□□□ -0.29
PDZD3-202ENST00000355547 MRPS36P82909 103 aaKnown RBP13.24□□□□□ -0.29
PDZD3-202ENST00000355547 ZNF702PQ9H963 129 aa13.24□□□□□ -0.29
PDZD3-202ENST00000355547 VPREB3Q9UKI3 123 aa13.24□□□□□ -0.29
PDZD3-202ENST00000355547 POLQO75417 2590 aa13.24□□□□□ -0.29
PDZD3-202ENST00000355547 HECTD1Q9ULT8 2610 aa13.24□□□□□ -0.29
PDZD3-202ENST00000355547 M0QXV9 152 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 SCGB1C2P0DMR2 95 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 FAM110AQ9BQ89 295 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 IGHV3-64A0A075B6Q5 118 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 NHLRC4P0CG21 123 aaPredicted RBP13.23□□□□□ -0.29
PDZD3-202ENST00000355547 PIK3CD-AS1Q5SR53 167 aa13.23□□□□□ -0.29
PDZD3-202ENST00000355547 KNCNA6PVL3 124 aa13.22□□□□□ -0.29
PDZD3-202ENST00000355547 IGHV3-30-3P0DP02 117 aa13.22□□□□□ -0.29
PDZD3-202ENST00000355547 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
PDZD3-202ENST00000355547 B5MCH6 92 aa13.22□□□□□ -0.29
PDZD3-202ENST00000355547 PROK1P58294 105 aa13.22□□□□□ -0.29
PDZD3-202ENST00000355547 NRGNQ92686 78 aa13.22□□□□□ -0.29
PDZD3-202ENST00000355547 CD28P10747 220 aa13.21□□□□□ -0.29
PDZD3-202ENST00000355547 RAX2Q96IS3 184 aa13.21□□□□□ -0.29
PDZD3-202ENST00000355547 H3BMM0 161 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 Q6YL49 198 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 LITAFQ99732 161 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 SORL1Q92673 2214 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 APCP25054 2843 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 IGHV3-73A0A0B4J1V6 119 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 FSHBP01225 129 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 DEFB131AP59861 70 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 SPXQ9BT56 116 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 TNFRSF18Q9Y5U5 241 aa13.2□□□□□ -0.3
PDZD3-202ENST00000355547 TGFAP01135 160 aa13.19□□□□□ -0.3
PDZD3-202ENST00000355547 ANKRD29Q8N6D5 301 aa13.19□□□□□ -0.3
PDZD3-202ENST00000355547 RBMY1BA6NDE4 496 aaKnown RBP13.19□□□□□ -0.3
PDZD3-202ENST00000355547 RBMY1EA6NEQ0 496 aaKnown RBP13.19□□□□□ -0.3
PDZD3-202ENST00000355547 RBMY1DP0C7P1 496 aaKnown RBP13.19□□□□□ -0.3
PDZD3-202ENST00000355547 SPANXA1Q9NS26 97 aa13.18□□□□□ -0.3
PDZD3-202ENST00000355547 HTN1P15515 57 aa13.18□□□□□ -0.3
PDZD3-202ENST00000355547 Q6Q795 121 aa13.18□□□□□ -0.3
PDZD3-202ENST00000355547 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
PDZD3-202ENST00000355547 IGHV1-58A0A0C4DH39 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE12JA6NER3 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 SLC25A20O43772 301 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE7O76087 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE12FP0CL80 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE12GP0CL81 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE12IP0CL82 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 NDUFV3P56181 108 aaKnown RBP13.17□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE4Q13068 117 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
PDZD3-202ENST00000355547 Q6ZSN1 163 aa13.17□□□□□ -0.3
PDZD3-202ENST00000355547 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 SLURP1P55000 103 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 DUX3Q96PT4 197 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 Q9UF83 564 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 KRTAP10-9P60411 292 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE2BQ13066 116 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE2EQ4V326 116 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 LINC01600Q96MT4 127 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 GAGE2DQ9UEU5 116 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 ITPR2Q14571 2701 aa13.16□□□□□ -0.3
PDZD3-202ENST00000355547 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 UBE2D4Q9Y2X8 147 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 C9JAW5 83 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 PRM2P04554 102 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 VSIG2Q96IQ7 327 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
PDZD3-202ENST00000355547 TRBV30A0A0K0K1B3 111 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 C18orf65Q6ZTR6 163 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 CREBBPQ92793 2442 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 H7C2G1 150 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 MAPK1IP1LQ8NDC0 245 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 NDUFA12Q9UI09 145 aa13.14□□□□□ -0.31
PDZD3-202ENST00000355547 UNC79Q9P2D8 2635 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 SNCGO76070 127 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 DEFB136Q30KP8 78 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 ADAMTSL4-AS1Q5T5F5 129 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 DNAJC30Q96LL9 226 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 ATXN8Q156A1 80 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 BEAN1Q3B7T3 259 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 RNASE13Q5GAN3 156 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms