RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 WFDC2Q14508 124 aa13.56□□□□□ -0.24
COL18A1-202ENST00000355480 ANKHD1Q8IWZ3 2542 aaKnown RBP13.56□□□□□ -0.24
COL18A1-202ENST00000355480 B5MCH6 92 aa13.56□□□□□ -0.24
COL18A1-202ENST00000355480 IGKV2D-26A0A0A0MRZ7 120 aa13.56□□□□□ -0.24
COL18A1-202ENST00000355480 FAM236AA0A1B0GUQ0 79 aa13.55□□□□□ -0.24
COL18A1-202ENST00000355480 FAM236BA0A1B0GV22 79 aa13.55□□□□□ -0.24
COL18A1-202ENST00000355480 PTPN13Q12923 2485 aa13.55□□□□□ -0.24
COL18A1-202ENST00000355480 MIAQ16674 131 aa13.55□□□□□ -0.24
COL18A1-202ENST00000355480 C20orf173Q96LM9 149 aa13.55□□□□□ -0.24
COL18A1-202ENST00000355480 C11orf1Q9H5F2 150 aa13.54□□□□□ -0.24
COL18A1-202ENST00000355480 TNRC6AQ8NDV7 1962 aaKnown RBP13.54□□□□□ -0.24
COL18A1-202ENST00000355480 A0A087WZ39 114 aa13.54□□□□□ -0.24
COL18A1-202ENST00000355480 LINC00467Q9BRT7 94 aa13.54□□□□□ -0.24
COL18A1-202ENST00000355480 A0A096LNI7 61 aa13.54□□□□□ -0.24
COL18A1-202ENST00000355480 LINC00322Q6ZN03 302 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-202ENST00000355480 H3BT86 120 aa13.53□□□□□ -0.24
COL18A1-202ENST00000355480 BRWD1-AS2P59051 145 aa13.53□□□□□ -0.24
COL18A1-202ENST00000355480 C2orf16Q68DN1 1984 aa13.53□□□□□ -0.24
COL18A1-202ENST00000355480 C1orf229Q6ZS94 237 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-202ENST00000355480 FAM19A1Q7Z5A9 133 aa13.52□□□□□ -0.24
COL18A1-202ENST00000355480 LY6G6DO95868 133 aa13.52□□□□□ -0.24
COL18A1-202ENST00000355480 C10orf99Q6UWK7 81 aa13.52□□□□□ -0.25
COL18A1-202ENST00000355480 PDE6GP18545 87 aa13.51□□□□□ -0.25
COL18A1-202ENST00000355480 FREM1Q5H8C1 2179 aa13.51□□□□□ -0.25
COL18A1-202ENST00000355480 FSTL3O95633 263 aa13.51□□□□□ -0.25
COL18A1-202ENST00000355480 MIFP14174 115 aa13.51□□□□□ -0.25
COL18A1-202ENST00000355480 TMEM131Q92545 1883 aa13.51□□□□□ -0.25
COL18A1-202ENST00000355480 A0A0J9YXY3 114 aa13.51□□□□□ -0.25
COL18A1-202ENST00000355480 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
COL18A1-202ENST00000355480 HIST2H2BDQ6DRA6 164 aa13.5□□□□□ -0.25
COL18A1-202ENST00000355480 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
COL18A1-202ENST00000355480 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
COL18A1-202ENST00000355480 NEXN-AS1Q8NBZ9 246 aa13.5□□□□□ -0.25
COL18A1-202ENST00000355480 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
COL18A1-202ENST00000355480 IGKV4-1P06312 121 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 FOXI1Q12951 378 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 H7C423 109 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 TAX1BP3O14907 124 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 COL4A3Q01955 1670 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 CRYGBP07316 175 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 C11orf71Q6IPW1 123 aa13.49□□□□□ -0.25
COL18A1-202ENST00000355480 EBI3Q14213 229 aa13.48□□□□□ -0.25
COL18A1-202ENST00000355480 CDKN2A-AS1Q9UH64 79 aa13.48□□□□□ -0.25
COL18A1-202ENST00000355480 SS18L2Q9UHA2 77 aa13.48□□□□□ -0.25
COL18A1-202ENST00000355480 CACNA1AO00555 2505 aa13.48□□□□□ -0.25
COL18A1-202ENST00000355480 LY6LH3BQJ8 138 aa13.48□□□□□ -0.25
COL18A1-202ENST00000355480 Q6ZPA2 131 aa13.48□□□□□ -0.25
COL18A1-202ENST00000355480 CFAP126Q5VTH2 177 aa13.47□□□□□ -0.25
COL18A1-202ENST00000355480 KIR2DL5BQ8NHK3 375 aa13.47□□□□□ -0.25
COL18A1-202ENST00000355480 ZFAND3Q9H8U3 227 aa13.47□□□□□ -0.25
COL18A1-202ENST00000355480 FAM19A5Q7Z5A7 132 aaPredicted RBP13.46□□□□□ -0.25
COL18A1-202ENST00000355480 BPY2O14599 106 aa13.46□□□□□ -0.25
COL18A1-202ENST00000355480 SMIM20Q8N5G0 67 aa13.46□□□□□ -0.25
COL18A1-202ENST00000355480 SEC61GP60059 68 aa13.46□□□□□ -0.25
COL18A1-202ENST00000355480 TRBV6-8A0A0A6YYG3 113 aa13.46□□□□□ -0.26
COL18A1-202ENST00000355480 GDF5OSQ5U4N7 250 aa13.46□□□□□ -0.26
COL18A1-202ENST00000355480 DENND4AQ7Z401 1863 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 TRAV10A0A0B4J240 114 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 PTH2Q96A98 100 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 SORL1Q92673 2214 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
COL18A1-202ENST00000355480 MLST8Q9BVC4 326 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 PRO3102Q9H379 93 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 XAGE1AQ9HD64 81 aa13.44□□□□□ -0.26
COL18A1-202ENST00000355480 TRBV6-4A0A1B0GX49 114 aa13.43□□□□□ -0.26
COL18A1-202ENST00000355480 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
COL18A1-202ENST00000355480 IGLV4-3A0A075B6K6 122 aa13.43□□□□□ -0.26
COL18A1-202ENST00000355480 OBSL1O75147 1896 aa13.43□□□□□ -0.26
COL18A1-202ENST00000355480 PSMG3-AS1Q96PY0 264 aa13.43□□□□□ -0.26
COL18A1-202ENST00000355480 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-202ENST00000355480 NCOA6Q14686 2063 aaPredicted RBP13.42□□□□□ -0.26
COL18A1-202ENST00000355480 TCL1BO95988 128 aa13.42□□□□□ -0.26
COL18A1-202ENST00000355480 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
COL18A1-202ENST00000355480 Q8N976 141 aa13.42□□□□□ -0.26
COL18A1-202ENST00000355480 IGLV2-18A0A075B6J9 118 aa13.42□□□□□ -0.26
COL18A1-202ENST00000355480 LINC01006Q8NI28 216 aa13.42□□□□□ -0.26
COL18A1-202ENST00000355480 PROK1P58294 105 aa13.42□□□□□ -0.26
COL18A1-202ENST00000355480 EIF4EBP1Q13541 118 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-202ENST00000355480 M0QY20 66 aa13.41□□□□□ -0.26
COL18A1-202ENST00000355480 SYCNQ0VAF6 134 aa13.41□□□□□ -0.26
COL18A1-202ENST00000355480 ZNF22P17026 224 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-202ENST00000355480 C7orf33Q8WU49 177 aa13.4□□□□□ -0.26
COL18A1-202ENST00000355480 PRR14LQ5THK1 2151 aa13.4□□□□□ -0.26
COL18A1-202ENST00000355480 IBA57-AS1B1ANH7 110 aa13.4□□□□□ -0.26
COL18A1-202ENST00000355480 UPK3BQ9BT76 320 aa13.4□□□□□ -0.26
COL18A1-202ENST00000355480 DSCAML1Q8TD84 2053 aa13.4□□□□□ -0.26
COL18A1-202ENST00000355480 TMEM223A0PJW6 202 aa13.4□□□□□ -0.27
COL18A1-202ENST00000355480 ZNF295-AS1Q8N0V1 137 aa13.4□□□□□ -0.27
COL18A1-202ENST00000355480 CRIP3Q6Q6R5 217 aa13.39□□□□□ -0.27
COL18A1-202ENST00000355480 CASC2Q6XLA1 102 aa13.39□□□□□ -0.27
COL18A1-202ENST00000355480 ARHGAP21Q5T5U3 1957 aa13.39□□□□□ -0.27
COL18A1-202ENST00000355480 M0R2N4 97 aa13.39□□□□□ -0.27
COL18A1-202ENST00000355480 PIK3CD-AS1Q5SR53 167 aa13.38□□□□□ -0.27
COL18A1-202ENST00000355480 TRAV23DV6A0A075B6W5 121 aa13.38□□□□□ -0.27
COL18A1-202ENST00000355480 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
COL18A1-202ENST00000355480 DSCAMO60469 2012 aa13.37□□□□□ -0.27
COL18A1-202ENST00000355480 SLPIP03973 132 aa13.37□□□□□ -0.27
COL18A1-202ENST00000355480 LTBP2Q14767 1821 aa13.37□□□□□ -0.27
COL18A1-202ENST00000355480 C18orf65Q6ZTR6 163 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms