RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 Q6ZQT7 251 aa9.24□□□□□ -0.93
COLCA1-201ENST00000355430 A0A0J9YX75 114 aa9.23□□□□□ -0.93
COLCA1-201ENST00000355430 ZNF702PQ9H963 129 aa9.23□□□□□ -0.93
COLCA1-201ENST00000355430 K7EQD1 137 aa9.23□□□□□ -0.93
COLCA1-201ENST00000355430 DEFB4AO15263 64 aa9.23□□□□□ -0.93
COLCA1-201ENST00000355430 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
COLCA1-201ENST00000355430 DNAJC30Q96LL9 226 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 LAMTOR3Q9UHA4 124 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 P0DMU3 169 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 FAM231AP0DMU4 169 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 FAM231CP0DMU5 169 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 C5orf42Q9H799 3197 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 TRAV13-2A0A0B4J235 113 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 DSCAML1Q8TD84 2053 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 IGHV3-30-3P0DP02 117 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 A0A096LNJ9 63 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 HHLA3Q9XRX5 114 aa9.22□□□□□ -0.93
COLCA1-201ENST00000355430 NXPH4O95158 308 aa9.21□□□□□ -0.93
COLCA1-201ENST00000355430 MRGPRG-AS1Q2M3A8 158 aa9.21□□□□□ -0.93
COLCA1-201ENST00000355430 DEFB114Q30KQ6 69 aa9.21□□□□□ -0.93
COLCA1-201ENST00000355430 UBE2BP63146 152 aa9.21□□□□□ -0.93
COLCA1-201ENST00000355430 SOCS3O14543 225 aa9.21□□□□□ -0.94
COLCA1-201ENST00000355430 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
COLCA1-201ENST00000355430 NFE4Q86UQ8 179 aa9.21□□□□□ -0.94
COLCA1-201ENST00000355430 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
COLCA1-201ENST00000355430 ARHGAP32A7KAX9 2087 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 IGHV3-30P01768 117 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 IGHV3-33P01772 117 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 MT-ATP8P03928 68 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 IGHV3-30-5P0DP03 117 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 ESM1Q9NQ30 184 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 UFSP1Q6NVU6 142 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 HTTP42858 3142 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 PRRC2AP48634 2157 aaKnown RBP9.2□□□□□ -0.94
COLCA1-201ENST00000355430 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
COLCA1-201ENST00000355430 Q6ZUT4 128 aa9.19□□□□□ -0.94
COLCA1-201ENST00000355430 A0A0J9YXY3 114 aa9.19□□□□□ -0.94
COLCA1-201ENST00000355430 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
COLCA1-201ENST00000355430 DAZ4Q86SG3 579 aaKnown RBP9.19□□□□□ -0.94
COLCA1-201ENST00000355430 DAZ3Q9NR90 486 aaKnown RBP9.19□□□□□ -0.94
COLCA1-201ENST00000355430 RS1O15537 224 aa9.19□□□□□ -0.94
COLCA1-201ENST00000355430 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
COLCA1-201ENST00000355430 TMEM223A0PJW6 202 aa9.18□□□□□ -0.94
COLCA1-201ENST00000355430 LYRM9A8MSI8 78 aa9.18□□□□□ -0.94
COLCA1-201ENST00000355430 RNASE3P12724 160 aaKnown RBP9.18□□□□□ -0.94
COLCA1-201ENST00000355430 PRO0255Q9UI72 69 aa9.18□□□□□ -0.94
COLCA1-201ENST00000355430 HERV-K104P63124 156 aa9.17□□□□□ -0.94
COLCA1-201ENST00000355430 VSIG2Q96IQ7 327 aa9.17□□□□□ -0.94
COLCA1-201ENST00000355430 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
COLCA1-201ENST00000355430 A0A0B4J2C4 111 aa9.17□□□□□ -0.94
COLCA1-201ENST00000355430 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
COLCA1-201ENST00000355430 MIFP14174 115 aa9.17□□□□□ -0.94
COLCA1-201ENST00000355430 ZNF22P17026 224 aaPredicted RBP9.17□□□□□ -0.94
COLCA1-201ENST00000355430 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
COLCA1-201ENST00000355430 IGHV4-4A0A075B6R2 117 aa9.16□□□□□ -0.94
COLCA1-201ENST00000355430 XCL1P47992 114 aa9.16□□□□□ -0.94
COLCA1-201ENST00000355430 C14orf177Q52M58 125 aa9.16□□□□□ -0.94
COLCA1-201ENST00000355430 MIAQ16674 131 aa9.16□□□□□ -0.94
COLCA1-201ENST00000355430 C5orf38Q86SI9 138 aa9.16□□□□□ -0.94
COLCA1-201ENST00000355430 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.94
COLCA1-201ENST00000355430 M0QY20 66 aa9.15□□□□□ -0.94
COLCA1-201ENST00000355430 PSMB8P28062 276 aa9.15□□□□□ -0.94
COLCA1-201ENST00000355430 NACAE9PAV3 2078 aa9.15□□□□□ -0.94
COLCA1-201ENST00000355430 ODF3Q96PU9 254 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 K7EQG2 157 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 ACYP1P07311 99 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 PCSK5Q92824 1860 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 TEX49A0A1B0GTD5 131 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 Q6ZS46 218 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 LINC00482Q8N8I6 264 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 SND1-IT1Q9HBX3 110 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 CHD7Q9P2D1 2997 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 H3BT86 120 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 C10orf99Q6UWK7 81 aa9.14□□□□□ -0.95
COLCA1-201ENST00000355430 PIEZO2Q9H5I5 2752 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 CFAP126Q5VTH2 177 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 AVPP01185 164 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 PROK1P58294 105 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 TLN1Q9Y490 2541 aaKnown RBP9.13□□□□□ -0.95
COLCA1-201ENST00000355430 TRAV4A0A0B4J268 109 aa9.13□□□□□ -0.95
COLCA1-201ENST00000355430 RPL18AQ02543 176 aaKnown RBP9.13□□□□□ -0.95
COLCA1-201ENST00000355430 LINC00467Q9BRT7 94 aa9.12□□□□□ -0.95
COLCA1-201ENST00000355430 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
COLCA1-201ENST00000355430 COX8CQ7Z4L0 72 aa9.12□□□□□ -0.95
COLCA1-201ENST00000355430 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
COLCA1-201ENST00000355430 MYO18BQ8IUG5 2567 aa9.12□□□□□ -0.95
COLCA1-201ENST00000355430 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
COLCA1-201ENST00000355430 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms