RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 RNF183Q96D59 192 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 PPDPFQ9H3Y8 114 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 MRPL16Q9NX20 251 aaKnown RBP2.73□□□□□ -1.97
RNF38-203ENST00000353739 KMT2BQ9UMN6 2715 aaPredicted RBP2.73□□□□□ -1.97
RNF38-203ENST00000353739 IGLV4-3A0A075B6K6 122 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 UBE2L6O14933 153 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 AZU1P20160 251 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 TIRAPP58753 221 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 SLC25A29Q8N8R3 303 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 GTSF1LQ9H1H1 148 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 TEX15Q9BXT5 2789 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 M0QXV9 152 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 IFITM1P13164 125 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 PLA2G2AP14555 144 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 INSL3P51460 131 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 MAPKAPK5-AS1Q8N8E1 139 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 C11orf72Q8NBR9 251 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 PHLDA1Q8WV24 401 aaPredicted RBP2.72□□□□□ -1.97
RNF38-203ENST00000353739 BBC3Q96PG8 261 aaPredicted RBP2.72□□□□□ -1.97
RNF38-203ENST00000353739 SPANXDQ9BXN6 97 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
RNF38-203ENST00000353739 CSDC2Q9Y534 153 aaKnown RBP2.72□□□□□ -1.97
RNF38-203ENST00000353739 SAP30O75446 220 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 HILS1P60008 231 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 DGAT2L7PQ6IED9 249 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 VPS25Q9BRG1 176 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.72□□□□□ -1.975e-9■■■■■ 28.9
RNF38-203ENST00000353739 IGHV1-58A0A0C4DH39 117 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 DEFB136Q30KP8 78 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 GAGE13Q4V321 117 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 JPT2Q9H910 190 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 POLQO75417 2590 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 A0A0J9YY99 117 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 ZNF22P17026 224 aaPredicted RBP2.72□□□□□ -1.97
RNF38-203ENST00000353739 KRTAP10-9P60411 292 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 UBE2D4Q9Y2X8 147 aa2.72□□□□□ -1.97
RNF38-203ENST00000353739 RBMY1BA6NDE4 496 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 RBMY1EA6NEQ0 496 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 SMIM9A6NGZ8 99 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 RBMY1DP0C7P1 496 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 RPL39P62891 51 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 HERV-K104P63124 156 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 PGPEP1Q9NXJ5 209 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 FAM208BQ5VWN6 2430 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 H3BMG7 143 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 IGHV3-30P01768 117 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 RBMY1A1P0DJD3 496 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 RBMY1CP0DJD4 496 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 IGHV3-30-5P0DP03 117 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 UBE2D1P51668 147 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 OVOL2Q9BRP0 275 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 CHCHD7Q9BUK0 85 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 CSPG4Q6UVK1 2322 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ABCA12Q86UK0 2595 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ANKRD17O75179 2603 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 NF1P21359 2839 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 TRGV1A0A0A0MS02 117 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 TRBV6-4A0A1B0GX49 114 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 IGLV1-51P01701 117 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 P0DMU3 169 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 FAM231AP0DMU4 169 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 FAM231CP0DMU5 169 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 HTN1P15515 57 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 C18orf65Q6ZTR6 163 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 PRO1854Q9UHT4 67 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ANK2Q01484 3957 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ITPR2Q14571 2701 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 IGLV5-45A0A087WSX0 123 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 G3V4G9 280 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 COX6CP09669 75 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ATXN8Q156A1 80 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ODF3L2Q3SX64 289 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 C9orf66Q5T8R8 295 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 WFDC11Q8NEX6 87 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 ZNRF2Q8NHG8 242 aa2.71□□□□□ -1.98
RNF38-203ENST00000353739 RNASE8Q8TDE3 154 aaKnown RBP2.71□□□□□ -1.98
RNF38-203ENST00000353739 NDUFA1O15239 70 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 C5orf47Q569G3 176 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 TMEM243Q9BU79 118 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 PDZD2O15018 2839 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 K7ERJ3 54 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 SPRY2O43597 315 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 SCGB1C2P0DMR2 95 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 C10orf126Q8N4M7 172 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 LINC01006Q8NI28 216 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 HELZ2Q9BYK8 2649 aaKnown RBP2.7□□□□□ -1.98
RNF38-203ENST00000353739 TEX48A0A1B0GUV7 120 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 A0A1W2PRX2 142 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 ADARB2-AS1A8MUL3 147 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 TSPAN13O95857 204 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 PSMB2P49721 201 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 RBX1P62877 108 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 MIAQ16674 131 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 XCL2Q9UBD3 114 aa2.7□□□□□ -1.98
RNF38-203ENST00000353739 IGHV3-73A0A0B4J1V6 119 aa2.69□□□□□ -1.98
RNF38-203ENST00000353739 UBE2D3P61077 147 aa2.69□□□□□ -1.98
RNF38-203ENST00000353739 UBE2D2P62837 147 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms