RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
TUFT1-201ENST00000353024 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
TUFT1-201ENST00000353024 GCSHP23434 173 aa11.09□□□□□ -0.63
TUFT1-201ENST00000353024 EMP1P54849 157 aa11.09□□□□□ -0.63
TUFT1-201ENST00000353024 DNAJC30Q96LL9 226 aa11.09□□□□□ -0.63
TUFT1-201ENST00000353024 PRADC1Q9BSG0 188 aa11.09□□□□□ -0.63
TUFT1-201ENST00000353024 JMJD1CQ15652 2540 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 IGLV4-3A0A075B6K6 122 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 PLAC8L1A1L4L8 177 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
TUFT1-201ENST00000353024 NFE4Q86UQ8 179 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 CHCHD7Q9BUK0 85 aa11.08□□□□□ -0.64
TUFT1-201ENST00000353024 NSD1Q96L73 2696 aaPredicted RBP11.07□□□□□ -0.64
TUFT1-201ENST00000353024 TRGV1A0A0A0MS02 117 aa11.07□□□□□ -0.64
TUFT1-201ENST00000353024 CRYBA4P53673 196 aa11.07□□□□□ -0.64
TUFT1-201ENST00000353024 FXYD2P54710 66 aa11.07□□□□□ -0.64
TUFT1-201ENST00000353024 K7EP13 123 aa11.06□□□□□ -0.64
TUFT1-201ENST00000353024 Q6ZTI0 123 aa11.06□□□□□ -0.64
TUFT1-201ENST00000353024 GTF2H5Q6ZYL4 71 aa11.06□□□□□ -0.64
TUFT1-201ENST00000353024 FN1P02751 2386 aaKnown RBP11.06□□□□□ -0.64
TUFT1-201ENST00000353024 PF4P02776 101 aa11.06□□□□□ -0.64
TUFT1-201ENST00000353024 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
TUFT1-201ENST00000353024 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
TUFT1-201ENST00000353024 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
TUFT1-201ENST00000353024 AMELXQ99217 191 aa11.05□□□□□ -0.64
TUFT1-201ENST00000353024 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
TUFT1-201ENST00000353024 GAGE10A6NGK3 116 aa11.04□□□□□ -0.64
TUFT1-201ENST00000353024 SPATA3Q8NHX4 192 aa11.04□□□□□ -0.64
TUFT1-201ENST00000353024 HIST1H4GQ99525 98 aa11.04□□□□□ -0.64
TUFT1-201ENST00000353024 HIVEP1P15822 2718 aa11.04□□□□□ -0.64
TUFT1-201ENST00000353024 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 H3BUT2 72 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 FOSL1P15407 271 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 C16orf74Q96GX8 76 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
TUFT1-201ENST00000353024 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 VCX2Q9H322 139 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
TUFT1-201ENST00000353024 IGHV3-38A0A0C4DH36 116 aa11.02□□□□□ -0.64
TUFT1-201ENST00000353024 A0A1W2PPM0 123 aa11.02□□□□□ -0.64
TUFT1-201ENST00000353024 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.64
TUFT1-201ENST00000353024 PHLDA1Q8WV24 401 aaPredicted RBP11.02□□□□□ -0.64
TUFT1-201ENST00000353024 K7EP34 96 aa11.02□□□□□ -0.65
TUFT1-201ENST00000353024 CRLF1O75462 422 aa11.02□□□□□ -0.65
TUFT1-201ENST00000353024 TSPEAR-AS2P59090 65 aa11.02□□□□□ -0.65
TUFT1-201ENST00000353024 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
TUFT1-201ENST00000353024 OVOL2Q9BRP0 275 aa11.02□□□□□ -0.65
TUFT1-201ENST00000353024 A0A1B0GWB2 263 aa11.01□□□□□ -0.65
TUFT1-201ENST00000353024 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
TUFT1-201ENST00000353024 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
TUFT1-201ENST00000353024 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
TUFT1-201ENST00000353024 A0A0J9YXV3 536 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 TRBV10-1A0A0K0K1A3 114 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 TMEM223A0PJW6 202 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 IGKV2-29A2NJV5 120 aaPredicted RBP11□□□□□ -0.65
TUFT1-201ENST00000353024 FABP2P12104 132 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 COTL1Q14019 142 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 RAB37Q96AX2 223 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 SPANXA1Q9NS26 97 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 NHP2Q9NX24 153 aaKnown RBP11□□□□□ -0.65
TUFT1-201ENST00000353024 K7EQD1 137 aa11□□□□□ -0.65
TUFT1-201ENST00000353024 RRN3P1Q2M238 152 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 SCGB1D4Q6XE38 83 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 TMEM238LA0A1B0GVL6 79 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 A6NJY4 79 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 INSL3P51460 131 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 MRPS36P82909 103 aaKnown RBP10.99□□□□□ -0.65
TUFT1-201ENST00000353024 C12orf74Q32Q52 190 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 SLC25A29Q8N8R3 303 aa10.99□□□□□ -0.65
TUFT1-201ENST00000353024 GAGE12BA1L429 117 aa10.98□□□□□ -0.65
TUFT1-201ENST00000353024 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
TUFT1-201ENST00000353024 GAGE7O76087 117 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 UBE2D3P61077 147 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 UBE2D2P62837 147 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 CITED1Q99966 193 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 VWFP04275 2813 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 J3QQQ9 107 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 LEPROTO15243 131 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 RPL36AP83881 106 aaKnown RBP10.97□□□□□ -0.65
TUFT1-201ENST00000353024 RNASE13Q5GAN3 156 aaKnown RBP10.97□□□□□ -0.65
TUFT1-201ENST00000353024 Q6ZUT4 128 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
TUFT1-201ENST00000353024 RPL36ALQ969Q0 106 aaKnown RBP10.97□□□□□ -0.65
TUFT1-201ENST00000353024 SPCS1Q9Y6A9 102 aa10.97□□□□□ -0.65
TUFT1-201ENST00000353024 A0A0J9YY99 117 aa10.96□□□□□ -0.65
TUFT1-201ENST00000353024 K7ERJ3 54 aa10.96□□□□□ -0.65
TUFT1-201ENST00000353024 C9orf66Q5T8R8 295 aa10.96□□□□□ -0.65
TUFT1-201ENST00000353024 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
TUFT1-201ENST00000353024 NAA38Q9BRA0 125 aaKnown RBP10.96□□□□□ -0.65
TUFT1-201ENST00000353024 TIMM21Q9BVV7 248 aa10.96□□□□□ -0.65
TUFT1-201ENST00000353024 LGALS3P17931 250 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms