RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PRORYQ9H606 182 aa5.65□□□□□ -1.5
BRCA1-201ENST00000352993 TRACP01848 142 aa5.65□□□□□ -1.51
BRCA1-201ENST00000352993 GRNP28799 593 aaKnown RBP5.65□□□□□ -1.51
BRCA1-201ENST00000352993 HOXD3P31249 432 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-201ENST00000352993 LY6EQ16553 131 aa5.65□□□□□ -1.51
BRCA1-201ENST00000352993 IGFL3Q6UXB1 125 aa5.65□□□□□ -1.51
BRCA1-201ENST00000352993 POM121L12Q8N7R1 296 aa5.65□□□□□ -1.51
BRCA1-201ENST00000352993 LINC00526Q96FQ7 95 aa5.65□□□□□ -1.51
BRCA1-201ENST00000352993 LITAFQ99732 161 aa5.65□□□□□ -1.51
BRCA1-201ENST00000352993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-201ENST00000352993 IGKV3D-7A0A0C4DH55 119 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 IGKV2-29A2NJV5 120 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-201ENST00000352993 ZFP36P26651 326 aaKnown RBP5.64□□□□□ -1.51
BRCA1-201ENST00000352993 SPINK13Q1W4C9 94 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 SPANXDQ9BXN6 97 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 SPANXCQ9NY87 97 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 LRBAP50851 2863 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 ATMQ13315 3056 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 PTPRQQ9UMZ3 2332 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 IGHV3-38A0A0C4DH36 116 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 COX7CP15954 63 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 SDIM1Q6ZPB5 146 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 VSIG2Q96IQ7 327 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 Q9HAA7 133 aa5.64□□□□□ -1.51
BRCA1-201ENST00000352993 A0A1B0GX51 115 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 DNAL4O96015 105 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 C2CD3Q4AC94 2353 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 NDUFA4O00483 81 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 PROK1P58294 105 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 LRRC75A-AS1Q8N1F1 130 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 Q9H8V8 135 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 COX7A2LO14548 114 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 TIRAPP58753 221 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 DEFB121Q5J5C9 76 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 PEMTQ9UBM1 199 aa5.63□□□□□ -1.51
BRCA1-201ENST00000352993 AKAP13Q12802 2813 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 ANKRD11Q6UB99 2663 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-201ENST00000352993 IGHV3-16A0A0C4DH30 117 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 FAM223BA6NKX1 122 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 ATOX1O00244 68 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 SOCS3O14543 225 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 EDN2P20800 178 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 FAM223AQ8IWN6 122 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 CDKN2A-AS1Q9UH64 79 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 IGHV1OR15-1A0A075B7D0 117 aa5.62□□□□□ -1.51
BRCA1-201ENST00000352993 MRPS36P82909 103 aaKnown RBP5.62□□□□□ -1.51
BRCA1-201ENST00000352993 TLN1Q9Y490 2541 aaKnown RBP5.61□□□□□ -1.51
BRCA1-201ENST00000352993 KLLNB2CW77 178 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 INAFM2P0DMQ5 153 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 LINC01600Q96MT4 127 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 CITED2Q99967 270 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-201ENST00000352993 ATP5G1P05496 136 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 SYNJ2BPP57105 145 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 BRD3OSQ6XYD6 125 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 PRIMA1Q86XR5 153 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 C5orf56Q8N8D9 126 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 KIR2DL5BQ8NHK3 375 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 LINC00308Q8TCZ7 52 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 DCANP1Q8TF63 244 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 DSCR8Q96T75 97 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
BRCA1-201ENST00000352993 Q8N2B8 174 aa5.61□□□□□ -1.51
BRCA1-201ENST00000352993 LAMA5O15230 3695 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 LY6DQ14210 128 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 FAM19A4Q96LR4 140 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 MOB4Q9Y3A3 225 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 SPTBN4Q9H254 2564 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 A0A087WVE0 104 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 TINCRA0A1B0GVN0 87 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 CCL21O00585 134 aa5.6□□□□□ -1.51
BRCA1-201ENST00000352993 SNRPD3P62318 126 aaKnown RBP5.6□□□□□ -1.51
BRCA1-201ENST00000352993 C9orf85Q96MD7 179 aa5.59□□□□□ -1.51
BRCA1-201ENST00000352993 SIRPDQ9H106 197 aa5.59□□□□□ -1.51
BRCA1-201ENST00000352993 C14orf132Q9NPU4 83 aa5.59□□□□□ -1.51
BRCA1-201ENST00000352993 PRM2P04554 102 aa5.59□□□□□ -1.51
BRCA1-201ENST00000352993 RNF152Q8N8N0 203 aa5.59□□□□□ -1.51
BRCA1-201ENST00000352993 Q9UF83 564 aa5.59□□□□□ -1.51
BRCA1-201ENST00000352993 APRG1Q8IVJ8 170 aa5.59□□□□□ -1.52
BRCA1-201ENST00000352993 MALP21145 153 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 CXCL5P42830 114 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 PIK3CD-AS1Q5SR53 167 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 HRCT1Q6UXD1 115 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 LINC00467Q9BRT7 94 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 PYGO1Q9Y3Y4 419 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-201ENST00000352993 CSPG4Q6UVK1 2322 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 SVEP1Q4LDE5 3571 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 CRYGAP11844 174 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 RPL18AQ02543 176 aaKnown RBP5.58□□□□□ -1.52
BRCA1-201ENST00000352993 TOMM7Q9P0U1 55 aa5.58□□□□□ -1.52
BRCA1-201ENST00000352993 NDUFA1O15239 70 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 CRPP02741 224 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 FAM218AQ96MZ4 157 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 CYSTM1Q9H1C7 97 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 USMG5Q96IX5 58 aa5.57□□□□□ -1.52
BRCA1-201ENST00000352993 UBE2D4Q9Y2X8 147 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms