RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 SNCGO76070 127 aa13.8□□□□□ -0.2
SPNS1-204ENST00000352260 TRAV21A0A0B4J279 112 aa13.8□□□□□ -0.2
SPNS1-204ENST00000352260 SS18L2Q9UHA2 77 aa13.8□□□□□ -0.2
SPNS1-204ENST00000352260 NHLRC4P0CG21 123 aaPredicted RBP13.79□□□□□ -0.2
SPNS1-204ENST00000352260 NF1P21359 2839 aa13.79□□□□□ -0.2
SPNS1-204ENST00000352260 IGLV4-69A0A075B6H9 119 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 A0A0B4J2C4 111 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 H3BVH4 76 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 NDUFV3P56181 108 aaKnown RBP13.78□□□□□ -0.2
SPNS1-204ENST00000352260 SNRPD3P62318 126 aaKnown RBP13.78□□□□□ -0.2
SPNS1-204ENST00000352260 PMVKQ15126 192 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 GAGE7O76087 117 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 GAGE12FP0CL80 117 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 GAGE12GP0CL81 117 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 GAGE12IP0CL82 117 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 RNASE4P34096 147 aaKnown RBP13.78□□□□□ -0.2
SPNS1-204ENST00000352260 RPL13AP40429 203 aaKnown RBP13.78□□□□□ -0.2
SPNS1-204ENST00000352260 GAGE4Q13068 117 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 MRPL23Q16540 153 aaKnown RBP13.78□□□□□ -0.2
SPNS1-204ENST00000352260 CFAP161Q6P656 301 aa13.78□□□□□ -0.2
SPNS1-204ENST00000352260 CRYGDP07320 174 aa13.77□□□□□ -0.21
SPNS1-204ENST00000352260 TIMM17AQ99595 171 aa13.77□□□□□ -0.21
SPNS1-204ENST00000352260 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
SPNS1-204ENST00000352260 C16orf95Q9H693 158 aa13.77□□□□□ -0.21
SPNS1-204ENST00000352260 PEMTQ9UBM1 199 aa13.77□□□□□ -0.21
SPNS1-204ENST00000352260 RAX2Q96IS3 184 aa13.76□□□□□ -0.21
SPNS1-204ENST00000352260 A0A0J9YX75 114 aa13.76□□□□□ -0.21
SPNS1-204ENST00000352260 CD28P10747 220 aa13.76□□□□□ -0.21
SPNS1-204ENST00000352260 IFITM1P13164 125 aa13.76□□□□□ -0.21
SPNS1-204ENST00000352260 KLLNB2CW77 178 aa13.75□□□□□ -0.21
SPNS1-204ENST00000352260 B5MCH6 92 aa13.75□□□□□ -0.21
SPNS1-204ENST00000352260 HILS1P60008 231 aa13.75□□□□□ -0.21
SPNS1-204ENST00000352260 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
SPNS1-204ENST00000352260 C11orf44Q8N8P7 122 aa13.75□□□□□ -0.21
SPNS1-204ENST00000352260 LINC01006Q8NI28 216 aa13.75□□□□□ -0.21
SPNS1-204ENST00000352260 FN1P02751 2386 aaKnown RBP13.75□□□□□ -0.21
SPNS1-204ENST00000352260 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.74□□□□□ -0.21
SPNS1-204ENST00000352260 IGIPA6NJ69 53 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 ANXA2RQ3ZCQ2 193 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 KIR2DL4Q99706 377 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 HIVEP2P31629 2446 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 CUBNO60494 3623 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 IGHV3-33P01772 117 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 ATXN8Q156A1 80 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 ODF3Q96PU9 254 aa13.74□□□□□ -0.21
SPNS1-204ENST00000352260 C9JAW5 83 aa13.73□□□□□ -0.21
SPNS1-204ENST00000352260 RPL39LQ96EH5 51 aaKnown RBP13.73□□□□□ -0.21
SPNS1-204ENST00000352260 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
SPNS1-204ENST00000352260 NXPH4O95158 308 aa13.72□□□□□ -0.21
SPNS1-204ENST00000352260 AMELXQ99217 191 aa13.72□□□□□ -0.21
SPNS1-204ENST00000352260 PHLDA3Q9Y5J5 127 aa13.72□□□□□ -0.21
SPNS1-204ENST00000352260 TMEM263Q8WUH6 116 aaKnown RBP13.72□□□□□ -0.21
SPNS1-204ENST00000352260 J3QQQ9 107 aa13.71□□□□□ -0.21
SPNS1-204ENST00000352260 DUSP14O95147 198 aaKnown RBP13.71□□□□□ -0.21
SPNS1-204ENST00000352260 LGALS3P17931 250 aaKnown RBP13.71□□□□□ -0.21
SPNS1-204ENST00000352260 S100A4P26447 101 aaKnown RBP13.71□□□□□ -0.21
SPNS1-204ENST00000352260 CITED2Q99967 270 aaPredicted RBP13.71□□□□□ -0.21
SPNS1-204ENST00000352260 INAFM1C9JVW0 142 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 TSHBP01222 138 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 ZNF876PQ49A33 203 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 DYNLRB2Q8TF09 96 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 TRAV2A0A0B4J234 112 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 TMEM61Q8N0U2 210 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 Q8N1Y9 231 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 C14orf178Q8N769 122 aaPredicted RBP13.7□□□□□ -0.22
SPNS1-204ENST00000352260 TP53TG1Q9Y2A0 90 aa13.7□□□□□ -0.22
SPNS1-204ENST00000352260 LEPROTO15243 131 aa13.69□□□□□ -0.22
SPNS1-204ENST00000352260 GNRH2O43555 120 aa13.69□□□□□ -0.22
SPNS1-204ENST00000352260 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 TRBV30A0A0K0K1B3 111 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 TRBV10-2A0A0K0K1G8 114 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 CCL24O00175 119 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 VCYO14598 125 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 MGPP08493 103 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 POLR2KP53803 58 aaKnown RBP13.68□□□□□ -0.22
SPNS1-204ENST00000352260 DEFB114Q30KQ6 69 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 LINC01620Q4KN68 170 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 TRAV4A0A0B4J268 109 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 TRAV12-3A0A0B4J271 114 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 A4D1N5 150 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 NDUFA7O95182 113 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 TSPEAR-AS2P59090 65 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 SPANXDQ9BXN6 97 aa13.68□□□□□ -0.22
SPNS1-204ENST00000352260 FAM240AA0A1B0GVK7 77 aa13.67□□□□□ -0.22
SPNS1-204ENST00000352260 SDHAF1A6NFY7 115 aa13.67□□□□□ -0.22
SPNS1-204ENST00000352260 SPRY2O43597 315 aa13.67□□□□□ -0.22
SPNS1-204ENST00000352260 DEFB131AP59861 70 aa13.67□□□□□ -0.22
SPNS1-204ENST00000352260 RNASE3P12724 160 aaKnown RBP13.66□□□□□ -0.22
SPNS1-204ENST00000352260 TMEM170BQ5T4T1 132 aa13.66□□□□□ -0.22
SPNS1-204ENST00000352260 NTN5Q8WTR8 489 aaPredicted RBP13.66□□□□□ -0.22
SPNS1-204ENST00000352260 JMJD1CQ15652 2540 aa13.66□□□□□ -0.22
SPNS1-204ENST00000352260 TRAV12-2A0A075B6T6 113 aa13.66□□□□□ -0.22
SPNS1-204ENST00000352260 KNCNA6PVL3 124 aa13.66□□□□□ -0.22
SPNS1-204ENST00000352260 FAM159AQ6UWV7 190 aa13.66□□□□□ -0.22
SPNS1-204ENST00000352260 TRBV6-5A0A0K0K1A5 114 aa13.65□□□□□ -0.22
SPNS1-204ENST00000352260 SPINK13Q1W4C9 94 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms