RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 DOPEY2Q9Y3R5 2298 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 IGF2RP11717 2491 aa11.56□□□□□ -0.56
PTBP1-202ENST00000350092 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
PTBP1-202ENST00000350092 SPANXA1Q9NS26 97 aa11.56□□□□□ -0.56
PTBP1-202ENST00000350092 DEFB121Q5J5C9 76 aa11.56□□□□□ -0.56
PTBP1-202ENST00000350092 CCL19Q99731 98 aa11.56□□□□□ -0.56
PTBP1-202ENST00000350092 TRAV8-4A0A0B4J246 113 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 TIMM17BO60830 172 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 SYNJ2BPP57105 145 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 LY6DQ14210 128 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 TMEM61Q8N0U2 210 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 RBMY1BA6NDE4 496 aaKnown RBP11.55□□□□□ -0.56
PTBP1-202ENST00000350092 RBMY1EA6NEQ0 496 aaKnown RBP11.55□□□□□ -0.56
PTBP1-202ENST00000350092 H3BT86 120 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 IGHV4-59P01825 116 aa11.55□□□□□ -0.56
PTBP1-202ENST00000350092 RBMY1DP0C7P1 496 aaKnown RBP11.55□□□□□ -0.56
PTBP1-202ENST00000350092 NDUFV3P56181 108 aaKnown RBP11.55□□□□□ -0.56
PTBP1-202ENST00000350092 SNCGO76070 127 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 LST1O00453 97 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 PIK3CD-AS1Q5SR53 167 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 COL6A6A6NMZ7 2263 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 GAGE2BQ13066 116 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 GAGE2EQ4V326 116 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 GAGE2DQ9UEU5 116 aa11.54□□□□□ -0.56
PTBP1-202ENST00000350092 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
PTBP1-202ENST00000350092 GAGE5Q13069 117 aa11.53□□□□□ -0.56
PTBP1-202ENST00000350092 GAGE6Q13070 117 aa11.53□□□□□ -0.56
PTBP1-202ENST00000350092 C2orf82Q6UX34 121 aa11.53□□□□□ -0.56
PTBP1-202ENST00000350092 CLEC2BQ92478 149 aa11.53□□□□□ -0.56
PTBP1-202ENST00000350092 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
PTBP1-202ENST00000350092 KNCNA6PVL3 124 aa11.52□□□□□ -0.56
PTBP1-202ENST00000350092 GNLYP22749 145 aa11.52□□□□□ -0.56
PTBP1-202ENST00000350092 DEFB112Q30KQ8 113 aa11.52□□□□□ -0.56
PTBP1-202ENST00000350092 SMIM20Q8N5G0 67 aa11.52□□□□□ -0.56
PTBP1-202ENST00000350092 LINC00467Q9BRT7 94 aa11.52□□□□□ -0.56
PTBP1-202ENST00000350092 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
PTBP1-202ENST00000350092 PRM2P04554 102 aa11.52□□□□□ -0.57
PTBP1-202ENST00000350092 PRSS2P07478 247 aa11.52□□□□□ -0.57
PTBP1-202ENST00000350092 CRYBG3Q68DQ2 2970 aa11.52□□□□□ -0.57
PTBP1-202ENST00000350092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-202ENST00000350092 IGKV2-29A2NJV5 120 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-202ENST00000350092 B5MCH6 92 aa11.51□□□□□ -0.57
PTBP1-202ENST00000350092 DUX5Q96PT3 197 aa11.51□□□□□ -0.57
PTBP1-202ENST00000350092 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-202ENST00000350092 NPC2P61916 151 aa11.51□□□□□ -0.57
PTBP1-202ENST00000350092 NDUFA1O15239 70 aa11.51□□□□□ -0.57
PTBP1-202ENST00000350092 C15orf53Q8NAA6 179 aa11.51□□□□□ -0.57
PTBP1-202ENST00000350092 YAE1D1Q9NRH1 226 aa11.51□□□□□ -0.57
PTBP1-202ENST00000350092 AKAP6Q13023 2319 aa11.5□□□□□ -0.57
PTBP1-202ENST00000350092 IFITM1P13164 125 aa11.5□□□□□ -0.57
PTBP1-202ENST00000350092 MRPL23Q16540 153 aaKnown RBP11.5□□□□□ -0.57
PTBP1-202ENST00000350092 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
PTBP1-202ENST00000350092 C11orf72Q8NBR9 251 aa11.5□□□□□ -0.57
PTBP1-202ENST00000350092 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
PTBP1-202ENST00000350092 FAM240AA0A1B0GVK7 77 aa11.49□□□□□ -0.57
PTBP1-202ENST00000350092 ATP5J2P56134 94 aa11.49□□□□□ -0.57
PTBP1-202ENST00000350092 ITPR1Q14643 2758 aa11.49□□□□□ -0.57
PTBP1-202ENST00000350092 B4DSR2 109 aa11.49□□□□□ -0.57
PTBP1-202ENST00000350092 TIRAPP58753 221 aa11.49□□□□□ -0.57
PTBP1-202ENST00000350092 TMEM101Q96IK0 257 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 CDKN2A-AS1Q9UH64 79 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 IGHV3-53P01767 116 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 COX6CP09669 75 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 ZNF415Q09FC8 603 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 DNAJC30Q96LL9 226 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 CELSR2Q9HCU4 2923 aa11.48□□□□□ -0.57
PTBP1-202ENST00000350092 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 CCDC179H3BU77 68 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 HTN1P15515 57 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 DEFB131AP59861 70 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 UBE2E2Q96LR5 201 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
PTBP1-202ENST00000350092 DAND5Q8N907 189 aa11.46□□□□□ -0.57
PTBP1-202ENST00000350092 ZNF702PQ9H963 129 aa11.46□□□□□ -0.57
PTBP1-202ENST00000350092 COL12A1Q99715 3063 aa11.46□□□□□ -0.57
PTBP1-202ENST00000350092 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.57
PTBP1-202ENST00000350092 COX6A2Q02221 97 aa11.46□□□□□ -0.58
PTBP1-202ENST00000350092 PRORYQ9H606 182 aa11.46□□□□□ -0.58
PTBP1-202ENST00000350092 IGHV3-38A0A0C4DH36 116 aa11.45□□□□□ -0.58
PTBP1-202ENST00000350092 RS1O15537 224 aa11.45□□□□□ -0.58
PTBP1-202ENST00000350092 TTC32Q5I0X7 151 aa11.45□□□□□ -0.58
PTBP1-202ENST00000350092 IGHV3OR16-12A0A075B7B8 117 aa11.44□□□□□ -0.58
PTBP1-202ENST00000350092 A0A096LNT2 108 aa11.44□□□□□ -0.58
PTBP1-202ENST00000350092 LINC00308Q8TCZ7 52 aa11.44□□□□□ -0.58
PTBP1-202ENST00000350092 SLURP1P55000 103 aa11.44□□□□□ -0.58
PTBP1-202ENST00000350092 C18orf65Q6ZTR6 163 aa11.44□□□□□ -0.58
PTBP1-202ENST00000350092 GAGE12JA6NER3 117 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 GAGE7O76087 117 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 GAGE4Q13068 117 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 TRBV7-7A0A0K0K1E9 115 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 SPTBN4Q9H254 2564 aa11.43□□□□□ -0.58
PTBP1-202ENST00000350092 SOSTDC1Q6X4U4 206 aa11.42□□□□□ -0.58
PTBP1-202ENST00000350092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.582e-8■■■■□ 21.8
PTBP1-202ENST00000350092 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
PTBP1-202ENST00000350092 VPREB3Q9UKI3 123 aa11.42□□□□□ -0.58
PTBP1-202ENST00000350092 IL17DQ8TAD2 202 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 329.4 ms