RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 COX7A2LO14548 114 aa13.26□□□□□ -0.29
KRCC1-201ENST00000347055 IGKV3-20P01619 116 aa13.26□□□□□ -0.29
KRCC1-201ENST00000347055 CLEC2BQ92478 149 aa13.26□□□□□ -0.29
KRCC1-201ENST00000347055 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
KRCC1-201ENST00000347055 IGLV5-39A0A0G2JS06 123 aa13.25□□□□□ -0.29
KRCC1-201ENST00000347055 ATP5G1P05496 136 aa13.25□□□□□ -0.29
KRCC1-201ENST00000347055 ATMQ13315 3056 aa13.24□□□□□ -0.29
KRCC1-201ENST00000347055 IGHV3-53P01767 116 aa13.24□□□□□ -0.29
KRCC1-201ENST00000347055 TRACP01848 142 aa13.24□□□□□ -0.29
KRCC1-201ENST00000347055 MSMBP08118 114 aa13.24□□□□□ -0.29
KRCC1-201ENST00000347055 HERVK_113P63121 156 aa13.24□□□□□ -0.29
KRCC1-201ENST00000347055 LRBAP50851 2863 aa13.24□□□□□ -0.29
KRCC1-201ENST00000347055 LY6DQ14210 128 aa13.22□□□□□ -0.29
KRCC1-201ENST00000347055 LINC00308Q8TCZ7 52 aa13.22□□□□□ -0.29
KRCC1-201ENST00000347055 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
KRCC1-201ENST00000347055 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
KRCC1-201ENST00000347055 SHISA2Q6UWI4 295 aa13.22□□□□□ -0.29
KRCC1-201ENST00000347055 CITED2Q99967 270 aaPredicted RBP13.22□□□□□ -0.29
KRCC1-201ENST00000347055 TLN1Q9Y490 2541 aaKnown RBP13.21□□□□□ -0.29
KRCC1-201ENST00000347055 CACNA1BQ00975 2339 aa13.21□□□□□ -0.29
KRCC1-201ENST00000347055 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.29
KRCC1-201ENST00000347055 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.29
KRCC1-201ENST00000347055 RBMY1FQ15415 496 aaKnown RBP13.21□□□□□ -0.29
KRCC1-201ENST00000347055 CEMP1Q6PRD7 247 aaPredicted RBP13.21□□□□□ -0.29
KRCC1-201ENST00000347055 SDIM1Q6ZPB5 146 aa13.21□□□□□ -0.29
KRCC1-201ENST00000347055 LINC00643Q86TS7 51 aa13.21□□□□□ -0.29
KRCC1-201ENST00000347055 PRRC2AP48634 2157 aaKnown RBP13.21□□□□□ -0.29
KRCC1-201ENST00000347055 DUX3Q96PT4 197 aa13.2□□□□□ -0.3
KRCC1-201ENST00000347055 CDKN2A-AS1Q9UH64 79 aa13.2□□□□□ -0.3
KRCC1-201ENST00000347055 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
KRCC1-201ENST00000347055 CSDC2Q9Y534 153 aaKnown RBP13.2□□□□□ -0.3
KRCC1-201ENST00000347055 HERV-K104P63124 156 aa13.19□□□□□ -0.3
KRCC1-201ENST00000347055 DAND5Q8N907 189 aa13.19□□□□□ -0.3
KRCC1-201ENST00000347055 RS1O15537 224 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 PF4P02776 101 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 CXCL5P42830 114 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 UBE2E2Q96LR5 201 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 LAMA5O15230 3695 aa13.18□□□□□ -0.3
KRCC1-201ENST00000347055 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
KRCC1-201ENST00000347055 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
KRCC1-201ENST00000347055 B4DSR2 109 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 PROK1P58294 105 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 IGHV3-73A0A0B4J1V6 119 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
KRCC1-201ENST00000347055 Q6ZSV7 163 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 CCL19Q99731 98 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 OVOL2Q9BRP0 275 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 PEMTQ9UBM1 199 aa13.17□□□□□ -0.3
KRCC1-201ENST00000347055 ABCA2Q9BZC7 2435 aa13.16□□□□□ -0.3
KRCC1-201ENST00000347055 NPC2P61916 151 aa13.16□□□□□ -0.3
KRCC1-201ENST00000347055 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
KRCC1-201ENST00000347055 A8MZ25 164 aa13.15□□□□□ -0.3
KRCC1-201ENST00000347055 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
KRCC1-201ENST00000347055 TMEM95Q3KNT9 176 aa13.15□□□□□ -0.3
KRCC1-201ENST00000347055 Q9H8V8 135 aa13.15□□□□□ -0.3
KRCC1-201ENST00000347055 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.31
KRCC1-201ENST00000347055 DUX5Q96PT3 197 aa13.15□□□□□ -0.31
KRCC1-201ENST00000347055 Q6ZSN1 163 aa13.14□□□□□ -0.31
KRCC1-201ENST00000347055 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
KRCC1-201ENST00000347055 IGHV3OR16-12A0A075B7B8 117 aa13.13□□□□□ -0.31
KRCC1-201ENST00000347055 DSCR9P59020 149 aa13.13□□□□□ -0.31
KRCC1-201ENST00000347055 LINC00242Q5T6M2 205 aa13.13□□□□□ -0.31
KRCC1-201ENST00000347055 ZNF625Q96I27 306 aaPredicted RBP13.13□□□□□ -0.31
KRCC1-201ENST00000347055 LINC01587Q99440 93 aa13.13□□□□□ -0.31
KRCC1-201ENST00000347055 KNCNA6PVL3 124 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 C19orf84I3L1E1 186 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 DEFB131AP59861 70 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 SMIM1B2RUZ4 78 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 J3QLI3 93 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 INSP01308 110 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 CHCHD5Q9BSY4 110 aa13.12□□□□□ -0.31
KRCC1-201ENST00000347055 IGHV4-30-2A0A087WSY4 118 aa13.11□□□□□ -0.31
KRCC1-201ENST00000347055 FAM236AA0A1B0GUQ0 79 aa13.11□□□□□ -0.31
KRCC1-201ENST00000347055 FAM236BA0A1B0GV22 79 aa13.11□□□□□ -0.31
KRCC1-201ENST00000347055 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
KRCC1-201ENST00000347055 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
KRCC1-201ENST00000347055 IGHV4-59P01825 116 aa13.11□□□□□ -0.31
KRCC1-201ENST00000347055 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
KRCC1-201ENST00000347055 TTC28Q96AY4 2481 aa13.11□□□□□ -0.31
KRCC1-201ENST00000347055 TRAV13-2A0A0B4J235 113 aa13.1□□□□□ -0.31
KRCC1-201ENST00000347055 SMIM20Q8N5G0 67 aa13.1□□□□□ -0.31
KRCC1-201ENST00000347055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
KRCC1-201ENST00000347055 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
KRCC1-201ENST00000347055 UQCRQO14949 82 aa13.09□□□□□ -0.31
KRCC1-201ENST00000347055 ATP5J2P56134 94 aa13.09□□□□□ -0.31
KRCC1-201ENST00000347055 DAZ2Q13117 558 aaKnown RBP13.09□□□□□ -0.31
KRCC1-201ENST00000347055 DAZ4Q86SG3 579 aaKnown RBP13.09□□□□□ -0.31
KRCC1-201ENST00000347055 DAZ3Q9NR90 486 aaKnown RBP13.09□□□□□ -0.31
KRCC1-201ENST00000347055 DEFB112Q30KQ8 113 aa13.09□□□□□ -0.31
KRCC1-201ENST00000347055 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
KRCC1-201ENST00000347055 C3orf22Q8N5N4 141 aa13.09□□□□□ -0.31
KRCC1-201ENST00000347055 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
KRCC1-201ENST00000347055 BAALC-AS2P0C853 105 aa13.08□□□□□ -0.32
KRCC1-201ENST00000347055 HTN1P15515 57 aa13.08□□□□□ -0.32
KRCC1-201ENST00000347055 RPL28P46779 137 aaKnown RBP13.08□□□□□ -0.32
KRCC1-201ENST00000347055 COX6A2Q02221 97 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms