RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
VHL-202ENST00000345392 POLQO75417 2590 aa13.11□□□□□ -0.31
VHL-202ENST00000345392 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
VHL-202ENST00000345392 LITAFQ99732 161 aa13.11□□□□□ -0.31
VHL-202ENST00000345392 TIMM21Q9BVV7 248 aa13.11□□□□□ -0.31
VHL-202ENST00000345392 TRBV10-2A0A0K0K1G8 114 aa13.1□□□□□ -0.31
VHL-202ENST00000345392 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
VHL-202ENST00000345392 TRBV30A0A0K0K1B3 111 aa13.1□□□□□ -0.31
VHL-202ENST00000345392 HTN1P15515 57 aa13.1□□□□□ -0.31
VHL-202ENST00000345392 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
VHL-202ENST00000345392 CCDC179H3BU77 68 aa13.09□□□□□ -0.31
VHL-202ENST00000345392 CD28P10747 220 aa13.09□□□□□ -0.31
VHL-202ENST00000345392 PROK1P58294 105 aa13.09□□□□□ -0.31
VHL-202ENST00000345392 C2orf82Q6UX34 121 aa13.09□□□□□ -0.31
VHL-202ENST00000345392 C15orf53Q8NAA6 179 aa13.09□□□□□ -0.31
VHL-202ENST00000345392 IGHV1OR15-1A0A075B7D0 117 aa13.08□□□□□ -0.31
VHL-202ENST00000345392 A0A0J9YX75 114 aa13.08□□□□□ -0.31
VHL-202ENST00000345392 H3BMM0 161 aa13.08□□□□□ -0.31
VHL-202ENST00000345392 C10orf99Q6UWK7 81 aa13.08□□□□□ -0.31
VHL-202ENST00000345392 FAM104AQ969W3 186 aa13.08□□□□□ -0.31
VHL-202ENST00000345392 UBE2WQ96B02 151 aa13.08□□□□□ -0.31
VHL-202ENST00000345392 CLEC2BQ92478 149 aa13.08□□□□□ -0.32
VHL-202ENST00000345392 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
VHL-202ENST00000345392 H7C423 109 aa13.07□□□□□ -0.32
VHL-202ENST00000345392 IFITM1P13164 125 aa13.07□□□□□ -0.32
VHL-202ENST00000345392 H3BUA1 57 aa13.07□□□□□ -0.32
VHL-202ENST00000345392 RPL13AP40429 203 aaKnown RBP13.07□□□□□ -0.32
VHL-202ENST00000345392 IGHV4-30-2A0A087WSY4 118 aa13.06□□□□□ -0.32
VHL-202ENST00000345392 Q9UF83 564 aa13.06□□□□□ -0.32
VHL-202ENST00000345392 NDUFA12Q9UI09 145 aa13.06□□□□□ -0.32
VHL-202ENST00000345392 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
VHL-202ENST00000345392 BRI3O95415 125 aa13.06□□□□□ -0.32
VHL-202ENST00000345392 AVPP01185 164 aa13.06□□□□□ -0.32
VHL-202ENST00000345392 PRM2P04554 102 aa13.05□□□□□ -0.32
VHL-202ENST00000345392 NRGNQ92686 78 aa13.05□□□□□ -0.32
VHL-202ENST00000345392 A6NDX4 124 aa13.05□□□□□ -0.32
VHL-202ENST00000345392 DAND5Q8N907 189 aa13.05□□□□□ -0.32
VHL-202ENST00000345392 DUX3Q96PT4 197 aa13.05□□□□□ -0.32
VHL-202ENST00000345392 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 GAGE7O76087 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 GAGE12FP0CL80 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 GAGE12GP0CL81 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 GAGE12IP0CL82 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 MRPS36P82909 103 aaKnown RBP13.04□□□□□ -0.32
VHL-202ENST00000345392 GAGE4Q13068 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 CCL19Q99731 98 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 IGHV1-58A0A0C4DH39 117 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 K7EMT4 169 aa13.04□□□□□ -0.32
VHL-202ENST00000345392 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
VHL-202ENST00000345392 KNCNA6PVL3 124 aa13.03□□□□□ -0.32
VHL-202ENST00000345392 HELZ2Q9BYK8 2649 aaKnown RBP13.03□□□□□ -0.32
VHL-202ENST00000345392 DOPEY1Q5JWR5 2465 aa13.03□□□□□ -0.32
VHL-202ENST00000345392 ATP5J2P56134 94 aa13.02□□□□□ -0.32
VHL-202ENST00000345392 DUX5Q96PT3 197 aa13.02□□□□□ -0.33
VHL-202ENST00000345392 FASNP49327 2511 aaKnown RBP13.01□□□□□ -0.33
VHL-202ENST00000345392 COX6CP09669 75 aa13.01□□□□□ -0.33
VHL-202ENST00000345392 TENM4Q6N022 2769 aa13.01□□□□□ -0.33
VHL-202ENST00000345392 MIAQ16674 131 aa13.01□□□□□ -0.33
VHL-202ENST00000345392 C10orf105Q8TEF2 133 aa13.01□□□□□ -0.33
VHL-202ENST00000345392 VSIG2Q96IQ7 327 aa13.01□□□□□ -0.33
VHL-202ENST00000345392 LINC01600Q96MT4 127 aa13.01□□□□□ -0.33
VHL-202ENST00000345392 RBMY1A1P0DJD3 496 aaKnown RBP13□□□□□ -0.33
VHL-202ENST00000345392 RBMY1CP0DJD4 496 aa13□□□□□ -0.33
VHL-202ENST00000345392 RBMY1FQ15415 496 aaKnown RBP13□□□□□ -0.33
VHL-202ENST00000345392 SPANXDQ9BXN6 97 aa13□□□□□ -0.33
VHL-202ENST00000345392 SPANXCQ9NY87 97 aa13□□□□□ -0.33
VHL-202ENST00000345392 PYGO1Q9Y3Y4 419 aa13□□□□□ -0.33
VHL-202ENST00000345392 UBR5O95071 2799 aaPredicted RBP13□□□□□ -0.33
VHL-202ENST00000345392 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
VHL-202ENST00000345392 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
VHL-202ENST00000345392 MAPK1IP1LQ8NDC0 245 aa13□□□□□ -0.33
VHL-202ENST00000345392 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
VHL-202ENST00000345392 K7EQG2 157 aa12.99□□□□□ -0.33
VHL-202ENST00000345392 CFHR3Q02985 330 aa12.99□□□□□ -0.33
VHL-202ENST00000345392 Q6Q795 121 aa12.99□□□□□ -0.33
VHL-202ENST00000345392 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
VHL-202ENST00000345392 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
VHL-202ENST00000345392 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
VHL-202ENST00000345392 Q6ZSN1 163 aa12.98□□□□□ -0.33
VHL-202ENST00000345392 LST1O00453 97 aa12.97□□□□□ -0.33
VHL-202ENST00000345392 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
VHL-202ENST00000345392 H3BT86 120 aa12.97□□□□□ -0.33
VHL-202ENST00000345392 IGHV4-59P01825 116 aa12.97□□□□□ -0.33
VHL-202ENST00000345392 MSMBP08118 114 aa12.97□□□□□ -0.33
VHL-202ENST00000345392 NACAE9PAV3 2078 aa12.96□□□□□ -0.33
VHL-202ENST00000345392 TRGV11A0A075B6L2 103 aa12.96□□□□□ -0.33
VHL-202ENST00000345392 PSMB8P28062 276 aa12.96□□□□□ -0.33
VHL-202ENST00000345392 A0A0U1RRA0 63 aa12.96□□□□□ -0.34
VHL-202ENST00000345392 TINCRA0A1B0GVN0 87 aa12.96□□□□□ -0.34
VHL-202ENST00000345392 CHCHD7Q9BUK0 85 aa12.96□□□□□ -0.34
VHL-202ENST00000345392 UBE2D4Q9Y2X8 147 aa12.96□□□□□ -0.34
VHL-202ENST00000345392 FBN2P35556 2912 aa12.95□□□□□ -0.34
VHL-202ENST00000345392 CHCHD5Q9BSY4 110 aa12.95□□□□□ -0.34
VHL-202ENST00000345392 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
VHL-202ENST00000345392 ANKRD17O75179 2603 aaKnown RBP12.94□□□□□ -0.34
VHL-202ENST00000345392 ZNF625Q96I27 306 aaPredicted RBP12.94□□□□□ -0.34
VHL-202ENST00000345392 LINC00467Q9BRT7 94 aa12.94□□□□□ -0.34
VHL-202ENST00000345392 GCN1Q92616 2671 aaKnown RBP12.94□□□□□ -0.34
VHL-202ENST00000345392 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms