RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 C18orf65Q6ZTR6 163 aa16.84■□□□□ 0.29
NKX2-3-201ENST00000344586 MAPK1IP1LQ8NDC0 245 aa16.84■□□□□ 0.29
NKX2-3-201ENST00000344586 CHCHD7Q9BUK0 85 aa16.84■□□□□ 0.29
NKX2-3-201ENST00000344586 CSMD2Q7Z408 3487 aa16.84■□□□□ 0.29
NKX2-3-201ENST00000344586 DEFB136Q30KP8 78 aa16.84■□□□□ 0.29
NKX2-3-201ENST00000344586 Q1RN00 199 aa16.83■□□□□ 0.28
NKX2-3-201ENST00000344586 UBE2D4Q9Y2X8 147 aa16.83■□□□□ 0.28
NKX2-3-201ENST00000344586 CSPG4Q6UVK1 2322 aa16.82■□□□□ 0.28
NKX2-3-201ENST00000344586 SPG11Q96JI7 2443 aa16.82■□□□□ 0.28
NKX2-3-201ENST00000344586 TINCRA0A1B0GVN0 87 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 ZNF415Q09FC8 603 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 ADAMTSL4-AS1Q5T5F5 129 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 Q6YL49 198 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 SPANXA1Q9NS26 97 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 ATXN8Q156A1 80 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 PIK3CD-AS1Q5SR53 167 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 VSIG2Q96IQ7 327 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 SPANXDQ9BXN6 97 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 SPANXCQ9NY87 97 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 NDUFA12Q9UI09 145 aa16.81■□□□□ 0.28
NKX2-3-201ENST00000344586 FSHBP01225 129 aa16.8■□□□□ 0.28
NKX2-3-201ENST00000344586 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 IGKV2-29A2NJV5 120 aaPredicted RBP16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 TRIAP1O43715 76 aa16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 NACAE9PAV3 2078 aa16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 TRBV30A0A0K0K1B3 111 aa16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 A8MZ25 164 aa16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 LINC01620Q4KN68 170 aa16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 LINC00467Q9BRT7 94 aa16.79■□□□□ 0.28
NKX2-3-201ENST00000344586 CFAP46Q8IYW2 2715 aa16.78■□□□□ 0.28
NKX2-3-201ENST00000344586 TMEM61Q8N0U2 210 aa16.77■□□□□ 0.28
NKX2-3-201ENST00000344586 C11orf72Q8NBR9 251 aa16.77■□□□□ 0.28
NKX2-3-201ENST00000344586 BEX4Q9NWD9 120 aaPredicted RBP16.77■□□□□ 0.28
NKX2-3-201ENST00000344586 CACNA1AO00555 2505 aa16.77■□□□□ 0.28
NKX2-3-201ENST00000344586 PRSS2P07478 247 aa16.77■□□□□ 0.27
NKX2-3-201ENST00000344586 MIAQ16674 131 aa16.77■□□□□ 0.27
NKX2-3-201ENST00000344586 DOPEY1Q5JWR5 2465 aa16.76■□□□□ 0.27
NKX2-3-201ENST00000344586 SORL1Q92673 2214 aa16.76■□□□□ 0.27
NKX2-3-201ENST00000344586 LINC01600Q96MT4 127 aa16.76■□□□□ 0.27
NKX2-3-201ENST00000344586 IGHV3-38A0A0C4DH36 116 aa16.75■□□□□ 0.27
NKX2-3-201ENST00000344586 MAP6D1Q9H9H5 199 aa16.75■□□□□ 0.27
NKX2-3-201ENST00000344586 PKD1L2Q7Z442 2459 aa16.75■□□□□ 0.27
NKX2-3-201ENST00000344586 TMEM262E9PQX1 116 aa16.74■□□□□ 0.27
NKX2-3-201ENST00000344586 IGHV3-53P01767 116 aa16.74■□□□□ 0.27
NKX2-3-201ENST00000344586 GEMIN7Q9H840 131 aaKnown RBP16.74■□□□□ 0.27
NKX2-3-201ENST00000344586 ZFAND6Q6FIF0 208 aa16.74■□□□□ 0.27
NKX2-3-201ENST00000344586 NTN5Q8WTR8 489 aaPredicted RBP16.74■□□□□ 0.27
NKX2-3-201ENST00000344586 ICOSQ9Y6W8 199 aa16.74■□□□□ 0.27
NKX2-3-201ENST00000344586 DNAJC30Q96LL9 226 aa16.73■□□□□ 0.27
NKX2-3-201ENST00000344586 LINC01587Q99440 93 aa16.73■□□□□ 0.27
NKX2-3-201ENST00000344586 NPC2P61916 151 aa16.72■□□□□ 0.27
NKX2-3-201ENST00000344586 TRBV10-2A0A0K0K1G8 114 aa16.71■□□□□ 0.27
NKX2-3-201ENST00000344586 PRRC2AP48634 2157 aaKnown RBP16.71■□□□□ 0.27
NKX2-3-201ENST00000344586 BEAN1Q3B7T3 259 aa16.71■□□□□ 0.27
NKX2-3-201ENST00000344586 Q6ZSV7 163 aa16.71■□□□□ 0.27
NKX2-3-201ENST00000344586 PEMTQ9UBM1 199 aa16.71■□□□□ 0.27
NKX2-3-201ENST00000344586 FLNCQ14315 2725 aa16.71■□□□□ 0.27
NKX2-3-201ENST00000344586 IGHV4-31P0DP07 118 aa16.7■□□□□ 0.26
NKX2-3-201ENST00000344586 RS1O15537 224 aa16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 RPL13AP40429 203 aaKnown RBP16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 Q8N2B8 174 aa16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 CDKN2A-AS1Q9UH64 79 aa16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 USP9XQ93008 2570 aaPredicted RBP16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 INSP01308 110 aa16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 UTP20O75691 2785 aaKnown RBP16.69■□□□□ 0.26
NKX2-3-201ENST00000344586 IGLV5-45A0A087WSX0 123 aa16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 TIMM17BO60830 172 aa16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 RNF183Q96D59 192 aa16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 C4orf3Q8WVX3 66 aa16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 CITED1Q99966 193 aa16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 YAE1D1Q9NRH1 226 aa16.68■□□□□ 0.26
NKX2-3-201ENST00000344586 TEX49A0A1B0GTD5 131 aa16.67■□□□□ 0.26
NKX2-3-201ENST00000344586 FBN2P35556 2912 aa16.67■□□□□ 0.26
NKX2-3-201ENST00000344586 ZANQ9Y493 2812 aa16.67■□□□□ 0.26
NKX2-3-201ENST00000344586 TIRAPP58753 221 aa16.66■□□□□ 0.26
NKX2-3-201ENST00000344586 DYNLRB2Q8TF09 96 aa16.66■□□□□ 0.26
NKX2-3-201ENST00000344586 NDUFA1O15239 70 aa16.66■□□□□ 0.26
NKX2-3-201ENST00000344586 DEFB114Q30KQ6 69 aa16.65■□□□□ 0.26
NKX2-3-201ENST00000344586 DAND5Q8N907 189 aa16.65■□□□□ 0.26
NKX2-3-201ENST00000344586 TMEM101Q96IK0 257 aa16.65■□□□□ 0.26
NKX2-3-201ENST00000344586 TRAV26-1A0A087WT03 109 aa16.65■□□□□ 0.26
NKX2-3-201ENST00000344586 H7C423 109 aa16.65■□□□□ 0.26
NKX2-3-201ENST00000344586 COX6A2Q02221 97 aa16.64■□□□□ 0.25
NKX2-3-201ENST00000344586 KHDC1LQ5JSQ8 128 aa16.64■□□□□ 0.25
NKX2-3-201ENST00000344586 HIST2H2BDQ6DRA6 164 aa16.64■□□□□ 0.25
NKX2-3-201ENST00000344586 UBE2WQ96B02 151 aa16.64■□□□□ 0.25
NKX2-3-201ENST00000344586 IFITM1P13164 125 aa16.63■□□□□ 0.25
NKX2-3-201ENST00000344586 CLEC2BQ92478 149 aa16.63■□□□□ 0.25
NKX2-3-201ENST00000344586 IGHV3OR16-12A0A075B7B8 117 aa16.63■□□□□ 0.25
NKX2-3-201ENST00000344586 COX6CP09669 75 aa16.63■□□□□ 0.25
NKX2-3-201ENST00000344586 C2orf82Q6UX34 121 aa16.63■□□□□ 0.25
NKX2-3-201ENST00000344586 MXRA5Q9NR99 2828 aa16.61■□□□□ 0.25
NKX2-3-201ENST00000344586 XCL2Q9UBD3 114 aa16.61■□□□□ 0.25
NKX2-3-201ENST00000344586 H3BT86 120 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 LST1O00453 97 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 DGAT2L7PQ6IED9 249 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 IL17DQ8TAD2 202 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 CR1P17927 2039 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 TRAV8-4A0A0B4J246 113 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms