RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 IGHV3-38A0A0C4DH36 116 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 CFAP126Q5VTH2 177 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 A0A0J9YY99 117 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 J3QQQ9 107 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 CCL24O00175 119 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 LGALS3P17931 250 aaKnown RBP10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 AZU1P20160 251 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 PCP4P48539 62 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 RRN3P1Q2M238 152 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 MTURNQ8N3F0 131 aa10.83□□□□□ -0.68
VIPAS39-202ENST00000343765 APOMO95445 188 aa10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 STHQ8IWL8 128 aa10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 C11orf72Q8NBR9 251 aa10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 H3BMG7 143 aa10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 NFE4Q86UQ8 179 aa10.82□□□□□ -0.68
VIPAS39-202ENST00000343765 ZNF22P17026 224 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-202ENST00000343765 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-202ENST00000343765 YAE1D1Q9NRH1 226 aa10.81□□□□□ -0.68
VIPAS39-202ENST00000343765 FN1P02751 2386 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-202ENST00000343765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-202ENST00000343765 IGKV2-29A2NJV5 120 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-202ENST00000343765 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
VIPAS39-202ENST00000343765 A0A1B0GWB2 263 aa10.8□□□□□ -0.68
VIPAS39-202ENST00000343765 TMEM223A0PJW6 202 aa10.8□□□□□ -0.68
VIPAS39-202ENST00000343765 A6NJY4 79 aa10.8□□□□□ -0.68
VIPAS39-202ENST00000343765 RHODO00212 210 aa10.8□□□□□ -0.68
VIPAS39-202ENST00000343765 OTOGQ6ZRI0 2925 aa10.8□□□□□ -0.68
VIPAS39-202ENST00000343765 AMELXQ99217 191 aa10.79□□□□□ -0.68
VIPAS39-202ENST00000343765 SPXQ9BT56 116 aa10.79□□□□□ -0.68
VIPAS39-202ENST00000343765 VWFP04275 2813 aa10.79□□□□□ -0.68
VIPAS39-202ENST00000343765 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
VIPAS39-202ENST00000343765 ADARB2-AS1A8MUL3 147 aa10.78□□□□□ -0.68
VIPAS39-202ENST00000343765 FHL3Q13643 280 aa10.78□□□□□ -0.68
VIPAS39-202ENST00000343765 WFDC2Q14508 124 aa10.78□□□□□ -0.68
VIPAS39-202ENST00000343765 EDA2RQ9HAV5 297 aa10.78□□□□□ -0.68
VIPAS39-202ENST00000343765 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.68
VIPAS39-202ENST00000343765 C1orf158Q8N1D5 194 aa10.77□□□□□ -0.68
VIPAS39-202ENST00000343765 TEX29Q8N6K0 151 aa10.77□□□□□ -0.68
VIPAS39-202ENST00000343765 NBEAL2Q6ZNJ1 2754 aa10.77□□□□□ -0.68
VIPAS39-202ENST00000343765 LEPROTO15243 131 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 IGHV3-53P01767 116 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 UBE2D1P51668 147 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 SLC25A29Q8N8R3 303 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 WFDC10AQ9H1F0 79 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 LOC107984156A0A0G2JMH3 177 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 ARL17AQ8IVW1 177 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 LINC01006Q8NI28 216 aa10.77□□□□□ -0.69
VIPAS39-202ENST00000343765 TRAV8-3A0A0A6YYJ7 113 aa10.76□□□□□ -0.69
VIPAS39-202ENST00000343765 TEX48A0A1B0GUV7 120 aa10.76□□□□□ -0.69
VIPAS39-202ENST00000343765 TSPAN13O95857 204 aa10.76□□□□□ -0.69
VIPAS39-202ENST00000343765 KMT2BQ9UMN6 2715 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 Q6ZUT4 128 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 SMR3AQ99954 134 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 PYGO1Q9Y3Y4 419 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 G3V4G9 280 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 RS1O15537 224 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 COTL1Q14019 142 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 BEAN1Q3B7T3 259 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 PIK3CD-AS1Q5SR53 167 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 HIVEP2P31629 2446 aa10.75□□□□□ -0.69
VIPAS39-202ENST00000343765 TRAV25A0A0B4J276 109 aa10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 CFC1BP0CG36 223 aa10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 CFC1P0CG37 223 aa10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 SH2D6Q7Z4S9 175 aa10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 NDUFA11Q86Y39 141 aa10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 TIMM21Q9BVV7 248 aa10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-202ENST00000343765 IGHV3-30-3P0DP02 117 aa10.73□□□□□ -0.69
VIPAS39-202ENST00000343765 Q6ZTI0 123 aa10.73□□□□□ -0.69
VIPAS39-202ENST00000343765 C10orf126Q8N4M7 172 aa10.73□□□□□ -0.69
VIPAS39-202ENST00000343765 A8MZ25 164 aa10.73□□□□□ -0.69
VIPAS39-202ENST00000343765 GAGE13Q4V321 117 aa10.73□□□□□ -0.69
VIPAS39-202ENST00000343765 RPL35AP18077 110 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 PSMB2P49721 201 aa10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 MRPS36P82909 103 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 ETDBQ3ZM63 59 aa10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 PTH2Q96A98 100 aa10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 F8W1H4 67 aa10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 SPINK8P0C7L1 97 aa10.72□□□□□ -0.69
VIPAS39-202ENST00000343765 SPANXA1Q9NS26 97 aa10.71□□□□□ -0.69
VIPAS39-202ENST00000343765 TENM1Q9UKZ4 2725 aa10.71□□□□□ -0.69
VIPAS39-202ENST00000343765 A4D1N5 150 aa10.71□□□□□ -0.69
VIPAS39-202ENST00000343765 H7C2G1 150 aa10.71□□□□□ -0.7
VIPAS39-202ENST00000343765 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.7
VIPAS39-202ENST00000343765 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.7
VIPAS39-202ENST00000343765 RNASE1P07998 156 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-202ENST00000343765 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
VIPAS39-202ENST00000343765 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
VIPAS39-202ENST00000343765 DGAT2L7PQ6IED9 249 aa10.7□□□□□ -0.7
VIPAS39-202ENST00000343765 CLUHP3Q96NS8 147 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms