RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 RHOHQ15669 191 aa10.95□□□□□ -0.66
CLCN1-201ENST00000343257 MIAQ16674 131 aa10.95□□□□□ -0.66
CLCN1-201ENST00000343257 TRBV6-5A0A0K0K1A5 114 aa10.94□□□□□ -0.66
CLCN1-201ENST00000343257 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
CLCN1-201ENST00000343257 TMEM61Q8N0U2 210 aa10.94□□□□□ -0.66
CLCN1-201ENST00000343257 YAE1D1Q9NRH1 226 aa10.94□□□□□ -0.66
CLCN1-201ENST00000343257 ZNF292O60281 2723 aa10.93□□□□□ -0.66
CLCN1-201ENST00000343257 SPG11Q96JI7 2443 aa10.93□□□□□ -0.66
CLCN1-201ENST00000343257 FAM223BA6NKX1 122 aa10.93□□□□□ -0.66
CLCN1-201ENST00000343257 BLCAPP62952 87 aa10.93□□□□□ -0.66
CLCN1-201ENST00000343257 FAM223AQ8IWN6 122 aa10.93□□□□□ -0.66
CLCN1-201ENST00000343257 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
CLCN1-201ENST00000343257 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
CLCN1-201ENST00000343257 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
CLCN1-201ENST00000343257 FAM104AQ969W3 186 aa10.92□□□□□ -0.66
CLCN1-201ENST00000343257 A0A0J9YX75 114 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 BPESC1Q9GZL8 116 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 PTPRQQ9UMZ3 2332 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 VSIG2Q96IQ7 327 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 A0A1W2PPR1 153 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 C9orf85Q96MD7 179 aa10.91□□□□□ -0.66
CLCN1-201ENST00000343257 Q8N2B8 174 aa10.9□□□□□ -0.66
CLCN1-201ENST00000343257 CITED2Q99967 270 aaPredicted RBP10.9□□□□□ -0.66
CLCN1-201ENST00000343257 IGHV1OR15-1A0A075B7D0 117 aa10.9□□□□□ -0.66
CLCN1-201ENST00000343257 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
CLCN1-201ENST00000343257 TRBV7-7A0A0K0K1E9 115 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
CLCN1-201ENST00000343257 HERVK_113P63121 156 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 TMEM126AQ9H061 195 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
CLCN1-201ENST00000343257 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 MRPS36P82909 103 aaKnown RBP10.89□□□□□ -0.67
CLCN1-201ENST00000343257 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
CLCN1-201ENST00000343257 DAZ4Q86SG3 579 aaKnown RBP10.89□□□□□ -0.67
CLCN1-201ENST00000343257 DAZ3Q9NR90 486 aaKnown RBP10.89□□□□□ -0.67
CLCN1-201ENST00000343257 GAGE2AQ6NT46 116 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 Q9HAA7 133 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 EDA2RQ9HAV5 297 aa10.89□□□□□ -0.67
CLCN1-201ENST00000343257 IGHG2P01859 326 aa10.88□□□□□ -0.67
CLCN1-201ENST00000343257 C11orf71Q6IPW1 123 aa10.88□□□□□ -0.67
CLCN1-201ENST00000343257 SYNJ2BPP57105 145 aa10.88□□□□□ -0.67
CLCN1-201ENST00000343257 C3orf22Q8N5N4 141 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 DCANP1Q8TF63 244 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 FAM240AA0A1B0GVK7 77 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 ATP5J2P56134 94 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 NDUFA7O95182 113 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 KLRB1Q12918 225 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 Q6ZSN1 163 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 Q9H8V8 135 aa10.87□□□□□ -0.67
CLCN1-201ENST00000343257 BAALC-AS2P0C853 105 aa10.86□□□□□ -0.67
CLCN1-201ENST00000343257 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.86□□□□□ -0.67
CLCN1-201ENST00000343257 H3BUX3 64 aa10.86□□□□□ -0.67
CLCN1-201ENST00000343257 LINC00467Q9BRT7 94 aa10.86□□□□□ -0.67
CLCN1-201ENST00000343257 CSMD2Q7Z408 3487 aa10.86□□□□□ -0.67
CLCN1-201ENST00000343257 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
CLCN1-201ENST00000343257 LINC01600Q96MT4 127 aa10.85□□□□□ -0.67
CLCN1-201ENST00000343257 IGF2RP11717 2491 aa10.85□□□□□ -0.67
CLCN1-201ENST00000343257 DEFB121Q5J5C9 76 aa10.85□□□□□ -0.67
CLCN1-201ENST00000343257 COX6A2Q02221 97 aa10.85□□□□□ -0.67
CLCN1-201ENST00000343257 LINC00308Q8TCZ7 52 aa10.84□□□□□ -0.67
CLCN1-201ENST00000343257 C19orf54Q5BKX5 351 aa10.84□□□□□ -0.67
CLCN1-201ENST00000343257 DGAT2L7PQ6IED9 249 aa10.84□□□□□ -0.67
CLCN1-201ENST00000343257 LMO4P61968 165 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 FAM218AQ96MZ4 157 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
CLCN1-201ENST00000343257 hADV29S1A0JD25 119 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 IGHV4-38-2P0DP08 117 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 TIRAPP58753 221 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 SOSTDC1Q6X4U4 206 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
CLCN1-201ENST00000343257 TINCRA0A1B0GVN0 87 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 RBMY1A1P0DJD3 496 aaKnown RBP10.82□□□□□ -0.68
CLCN1-201ENST00000343257 RBMY1CP0DJD4 496 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
CLCN1-201ENST00000343257 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
CLCN1-201ENST00000343257 PIK3CD-AS1Q5SR53 167 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 LINC00643Q86TS7 51 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 COX7A2LO14548 114 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
CLCN1-201ENST00000343257 SNRPD3P62318 126 aaKnown RBP10.81□□□□□ -0.68
CLCN1-201ENST00000343257 USMG5Q96IX5 58 aa10.81□□□□□ -0.68
CLCN1-201ENST00000343257 CHCHD7Q9BUK0 85 aa10.81□□□□□ -0.68
CLCN1-201ENST00000343257 SPANXA1Q9NS26 97 aa10.81□□□□□ -0.68
CLCN1-201ENST00000343257 CYSTM1Q9H1C7 97 aa10.81□□□□□ -0.68
CLCN1-201ENST00000343257 UQCRQO14949 82 aa10.81□□□□□ -0.68
CLCN1-201ENST00000343257 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
CLCN1-201ENST00000343257 NRGNQ92686 78 aa10.8□□□□□ -0.68
CLCN1-201ENST00000343257 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
CLCN1-201ENST00000343257 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
CLCN1-201ENST00000343257 ABCA2Q9BZC7 2435 aa10.79□□□□□ -0.68
CLCN1-201ENST00000343257 ACYP1P07311 99 aa10.79□□□□□ -0.68
CLCN1-201ENST00000343257 PRIMA1Q86XR5 153 aa10.79□□□□□ -0.68
CLCN1-201ENST00000343257 A0A087WVE0 104 aa10.78□□□□□ -0.68
CLCN1-201ENST00000343257 LINC00526Q96FQ7 95 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms