RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.86
COL18A1-201ENST00000342220 CRLF1O75462 422 aa9.71□□□□□ -0.86
COL18A1-201ENST00000342220 ZFP2Q6ZN57 461 aa9.71□□□□□ -0.86
COL18A1-201ENST00000342220 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
COL18A1-201ENST00000342220 Q8N8P6 123 aa9.71□□□□□ -0.86
COL18A1-201ENST00000342220 TMEM160Q9NX00 188 aa9.71□□□□□ -0.86
COL18A1-201ENST00000342220 CSDC2Q9Y534 153 aaKnown RBP9.71□□□□□ -0.86
COL18A1-201ENST00000342220 FBN1P35555 2871 aaKnown RBP9.7□□□□□ -0.86
COL18A1-201ENST00000342220 C5orf47Q569G3 176 aa9.7□□□□□ -0.86
COL18A1-201ENST00000342220 ZMAT4Q9H898 229 aa9.7□□□□□ -0.86
COL18A1-201ENST00000342220 JPT2Q9H910 190 aa9.7□□□□□ -0.86
COL18A1-201ENST00000342220 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
COL18A1-201ENST00000342220 IGKCP01834 107 aa9.7□□□□□ -0.86
COL18A1-201ENST00000342220 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
COL18A1-201ENST00000342220 TMEM262E9PQX1 116 aa9.69□□□□□ -0.86
COL18A1-201ENST00000342220 K7EMT4 169 aa9.69□□□□□ -0.86
COL18A1-201ENST00000342220 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
COL18A1-201ENST00000342220 LINC01587Q99440 93 aa9.69□□□□□ -0.86
COL18A1-201ENST00000342220 STHQ8IWL8 128 aa9.69□□□□□ -0.86
COL18A1-201ENST00000342220 NRACQ8N912 160 aa9.69□□□□□ -0.86
COL18A1-201ENST00000342220 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
COL18A1-201ENST00000342220 ASIPP42127 132 aa9.68□□□□□ -0.86
COL18A1-201ENST00000342220 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
COL18A1-201ENST00000342220 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
COL18A1-201ENST00000342220 VCX2Q9H322 139 aa9.68□□□□□ -0.86
COL18A1-201ENST00000342220 ANKRD29Q8N6D5 301 aa9.68□□□□□ -0.86
COL18A1-201ENST00000342220 A8MWV9 139 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 K7EQG2 157 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 DPM2O94777 84 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 DEFB114Q30KQ6 69 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 C9orf47Q6ZRZ4 202 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 ZFAND2AQ8N6M9 145 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 ANK3Q12955 4377 aaKnown RBP9.67□□□□□ -0.86
COL18A1-201ENST00000342220 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
COL18A1-201ENST00000342220 MRPL35Q9NZE8 188 aaKnown RBP9.67□□□□□ -0.86
COL18A1-201ENST00000342220 LAGE3Q14657 143 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 MDFICQ9P1T7 246 aa9.67□□□□□ -0.86
COL18A1-201ENST00000342220 SOCS3O14543 225 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 ATP5LO75964 103 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 SPATA3Q8NHX4 192 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 A0A0J9YX75 114 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 TMEM89A2RUT3 159 aa9.66□□□□□ -0.86
COL18A1-201ENST00000342220 MRPL53Q96EL3 112 aaKnown RBP9.66□□□□□ -0.86
COL18A1-201ENST00000342220 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
COL18A1-201ENST00000342220 KRTAP10-3P60369 221 aa9.65□□□□□ -0.86
COL18A1-201ENST00000342220 Q8N2B8 174 aa9.65□□□□□ -0.86
COL18A1-201ENST00000342220 MAP6D1Q9H9H5 199 aa9.64□□□□□ -0.87
COL18A1-201ENST00000342220 IGHV3-16A0A0C4DH30 117 aa9.64□□□□□ -0.87
COL18A1-201ENST00000342220 PROK1P58294 105 aa9.64□□□□□ -0.87
COL18A1-201ENST00000342220 TAL2Q16559 108 aa9.64□□□□□ -0.87
COL18A1-201ENST00000342220 Q8N1Y9 231 aa9.64□□□□□ -0.87
COL18A1-201ENST00000342220 IGHV4-4A0A075B6R2 117 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 A4D1N5 150 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 ZNF56Q15929 161 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
COL18A1-201ENST00000342220 LGALS9O00182 355 aa9.62□□□□□ -0.87
COL18A1-201ENST00000342220 TCL1BO95988 128 aa9.62□□□□□ -0.87
COL18A1-201ENST00000342220 SRSF9Q13242 221 aaKnown RBP eCLIP9.62□□□□□ -0.871e-6■■□□□ 14
COL18A1-201ENST00000342220 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
COL18A1-201ENST00000342220 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
COL18A1-201ENST00000342220 HLA-DRB4P13762 266 aa9.62□□□□□ -0.87
COL18A1-201ENST00000342220 HLA-DRB4X5D2U9 266 aa9.62□□□□□ -0.87
COL18A1-201ENST00000342220 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 RPL39LQ96EH5 51 aaKnown RBP9.61□□□□□ -0.87
COL18A1-201ENST00000342220 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 C15orf53Q8NAA6 179 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 RASL10AQ92737 203 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 ZNF256Q9Y2P7 627 aaPredicted RBP9.61□□□□□ -0.87
COL18A1-201ENST00000342220 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
COL18A1-201ENST00000342220 TMEM126AQ9H061 195 aa9.61□□□□□ -0.87
COL18A1-201ENST00000342220 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
COL18A1-201ENST00000342220 ODF3L2Q3SX64 289 aa9.6□□□□□ -0.87
COL18A1-201ENST00000342220 H3BMM0 161 aa9.6□□□□□ -0.87
COL18A1-201ENST00000342220 DEFB4AO15263 64 aa9.6□□□□□ -0.87
COL18A1-201ENST00000342220 PKD1L1Q8TDX9 2849 aa9.6□□□□□ -0.87
COL18A1-201ENST00000342220 SUMO2P61956 95 aaKnown RBP9.59□□□□□ -0.87
COL18A1-201ENST00000342220 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
COL18A1-201ENST00000342220 LYRM7Q5U5X0 104 aa9.59□□□□□ -0.87
COL18A1-201ENST00000342220 SCGB3A1Q96QR1 104 aa9.59□□□□□ -0.87
COL18A1-201ENST00000342220 LENEPQ9Y5L5 61 aa9.59□□□□□ -0.87
COL18A1-201ENST00000342220 C9JAW5 83 aa9.58□□□□□ -0.88
COL18A1-201ENST00000342220 RNF152Q8N8N0 203 aa9.58□□□□□ -0.88
COL18A1-201ENST00000342220 RBMY1BA6NDE4 496 aaKnown RBP9.58□□□□□ -0.88
COL18A1-201ENST00000342220 RBMY1EA6NEQ0 496 aaKnown RBP9.58□□□□□ -0.88
COL18A1-201ENST00000342220 RBMY1DP0C7P1 496 aaKnown RBP9.58□□□□□ -0.88
COL18A1-201ENST00000342220 PLNP26678 52 aa9.58□□□□□ -0.88
COL18A1-201ENST00000342220 SCGB1D4Q6XE38 83 aa9.58□□□□□ -0.88
COL18A1-201ENST00000342220 H7C1H1 209 aa9.58□□□□□ -0.88
COL18A1-201ENST00000342220 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
COL18A1-201ENST00000342220 F8VRH5 84 aa9.57□□□□□ -0.88
COL18A1-201ENST00000342220 SLC25A20O43772 301 aa9.57□□□□□ -0.88
COL18A1-201ENST00000342220 PRB2P02812 416 aaPredicted RBP9.57□□□□□ -0.88
COL18A1-201ENST00000342220 DNAJC30Q96LL9 226 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms