RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
TPM3-208ENST00000341485 NACAE9PAV3 2078 aa10.91□□□□□ -0.66
TPM3-208ENST00000341485 M0R2P5 195 aa10.91□□□□□ -0.66
TPM3-208ENST00000341485 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
TPM3-208ENST00000341485 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
TPM3-208ENST00000341485 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.66
TPM3-208ENST00000341485 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
TPM3-208ENST00000341485 SETXQ7Z333 2677 aaKnown RBP10.9□□□□□ -0.66
TPM3-208ENST00000341485 A0A1B0GWB2 263 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 IGLV1-51P01701 117 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 CITED1Q99966 193 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 WNK1Q9H4A3 2382 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 A8MWV9 139 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 SCGB1D4Q6XE38 83 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 NFE4Q86UQ8 179 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 LINC01587Q99440 93 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 LINC00467Q9BRT7 94 aa10.89□□□□□ -0.67
TPM3-208ENST00000341485 C2CD3Q4AC94 2353 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 PIK3CD-AS1Q5SR53 167 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 Q6ZSN1 163 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 PTH2Q96A98 100 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 Q9UF83 564 aa10.88□□□□□ -0.67
TPM3-208ENST00000341485 INSP01308 110 aa10.87□□□□□ -0.67
TPM3-208ENST00000341485 CMC4P56277 68 aaPredicted RBP10.87□□□□□ -0.67
TPM3-208ENST00000341485 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
TPM3-208ENST00000341485 ZNF479Q96JC4 524 aa10.87□□□□□ -0.67
TPM3-208ENST00000341485 A0A0J9YY99 117 aa10.86□□□□□ -0.67
TPM3-208ENST00000341485 RRN3P1Q2M238 152 aa10.86□□□□□ -0.67
TPM3-208ENST00000341485 STHQ8IWL8 128 aa10.86□□□□□ -0.67
TPM3-208ENST00000341485 FAM104AQ969W3 186 aa10.86□□□□□ -0.67
TPM3-208ENST00000341485 AMELXQ99217 191 aa10.86□□□□□ -0.67
TPM3-208ENST00000341485 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
TPM3-208ENST00000341485 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
TPM3-208ENST00000341485 SETD2Q9BYW2 2564 aaPredicted RBP10.86□□□□□ -0.67
TPM3-208ENST00000341485 TMEM223A0PJW6 202 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 CLUHP3Q96NS8 147 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 J3QQQ9 107 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 ZNF22P17026 224 aaPredicted RBP10.85□□□□□ -0.67
TPM3-208ENST00000341485 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM3-208ENST00000341485 BEAN1Q3B7T3 259 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 KRTAP24-1Q3LI83 254 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 SPXQ9BT56 116 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 VCX2Q9H322 139 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 XCL2Q9UBD3 114 aa10.85□□□□□ -0.67
TPM3-208ENST00000341485 A0A0J9YXV3 536 aa10.84□□□□□ -0.67
TPM3-208ENST00000341485 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
TPM3-208ENST00000341485 K7ERU9 68 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 AZU1P20160 251 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 RHODO00212 210 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 LEPROTO15243 131 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 RS1O15537 224 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 UBE2D1P51668 147 aa10.83□□□□□ -0.68
TPM3-208ENST00000341485 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
TPM3-208ENST00000341485 A6NJY4 79 aa10.82□□□□□ -0.68
TPM3-208ENST00000341485 IGHV3-53P01767 116 aa10.82□□□□□ -0.68
TPM3-208ENST00000341485 LGALS3P17931 250 aaKnown RBP10.82□□□□□ -0.68
TPM3-208ENST00000341485 INSL3P51460 131 aa10.82□□□□□ -0.68
TPM3-208ENST00000341485 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
TPM3-208ENST00000341485 C1orf158Q8N1D5 194 aa10.82□□□□□ -0.68
TPM3-208ENST00000341485 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
TPM3-208ENST00000341485 SPANXB1Q9NS25 103 aaPredicted RBP10.82□□□□□ -0.68
TPM3-208ENST00000341485 SLC25A29Q8N8R3 303 aa10.81□□□□□ -0.68
TPM3-208ENST00000341485 FAM110AQ9BQ89 295 aa10.81□□□□□ -0.68
TPM3-208ENST00000341485 IGHV3-64A0A075B6Q5 118 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 VPS25Q9BRG1 176 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 IGHV3-30P01768 117 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 IGHV3-30-5P0DP03 117 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 SPATA3Q8NHX4 192 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 IL17DQ8TAD2 202 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
TPM3-208ENST00000341485 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
TPM3-208ENST00000341485 CRYBA4P53673 196 aa10.79□□□□□ -0.68
TPM3-208ENST00000341485 RNASE13Q5GAN3 156 aaKnown RBP10.79□□□□□ -0.68
TPM3-208ENST00000341485 WFDC10AQ9H1F0 79 aa10.79□□□□□ -0.68
TPM3-208ENST00000341485 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
TPM3-208ENST00000341485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.78□□□□□ -0.68
TPM3-208ENST00000341485 IGKV2-29A2NJV5 120 aaPredicted RBP10.78□□□□□ -0.68
TPM3-208ENST00000341485 H3BMG7 143 aa10.78□□□□□ -0.68
TPM3-208ENST00000341485 MRPS36P82909 103 aaKnown RBP10.78□□□□□ -0.68
TPM3-208ENST00000341485 PRIMA1Q86XR5 153 aa10.78□□□□□ -0.68
TPM3-208ENST00000341485 G3V4G9 280 aa10.78□□□□□ -0.68
TPM3-208ENST00000341485 C3orf56Q8N813 242 aa10.78□□□□□ -0.68
TPM3-208ENST00000341485 SPANXA1Q9NS26 97 aa10.78□□□□□ -0.68
TPM3-208ENST00000341485 C19orf73Q9NVV2 129 aa10.78□□□□□ -0.68
TPM3-208ENST00000341485 APOMO95445 188 aa10.77□□□□□ -0.69
TPM3-208ENST00000341485 TSPAN13O95857 204 aa10.77□□□□□ -0.69
TPM3-208ENST00000341485 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
TPM3-208ENST00000341485 PCP4P48539 62 aa10.76□□□□□ -0.69
TPM3-208ENST00000341485 COTL1Q14019 142 aa10.76□□□□□ -0.69
TPM3-208ENST00000341485 Q6ZUT4 128 aa10.76□□□□□ -0.69
TPM3-208ENST00000341485 F8W1H4 67 aa10.75□□□□□ -0.69
TPM3-208ENST00000341485 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
TPM3-208ENST00000341485 CFC1P0CG37 223 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms