RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
NECTIN1-203ENST00000341398 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
NECTIN1-203ENST00000341398 NTF3P20783 257 aa8.36□□□□□ -1.07
NECTIN1-203ENST00000341398 SULT1A2P50226 295 aa8.36□□□□□ -1.07
NECTIN1-203ENST00000341398 LYZL1Q6UWQ5 148 aa8.36□□□□□ -1.07
NECTIN1-203ENST00000341398 Q6ZRU5 148 aa8.36□□□□□ -1.07
NECTIN1-203ENST00000341398 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 RAB19A4D1S5 217 aa8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 AMTP48728 403 aa8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 MEF2BQ02080 365 aaPredicted RBP8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 MED9Q9NWA0 146 aa8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 C9orf62Q8N4C0 152 aa8.35□□□□□ -1.07
NECTIN1-203ENST00000341398 PANO1I0J062 215 aa8.34□□□□□ -1.07
NECTIN1-203ENST00000341398 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
NECTIN1-203ENST00000341398 TWIST1Q15672 202 aa8.34□□□□□ -1.07
NECTIN1-203ENST00000341398 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
NECTIN1-203ENST00000341398 A0A087WYN8 130 aa8.33□□□□□ -1.08
NECTIN1-203ENST00000341398 AMMECR1LQ6DCA0 310 aa8.33□□□□□ -1.08
NECTIN1-203ENST00000341398 C7orf33Q8WU49 177 aa8.33□□□□□ -1.08
NECTIN1-203ENST00000341398 TAGLN2P37802 199 aaKnown RBP8.32□□□□□ -1.08
NECTIN1-203ENST00000341398 RPS10P46783 165 aaKnown RBP8.32□□□□□ -1.08
NECTIN1-203ENST00000341398 TEX261Q6UWH6 196 aa8.32□□□□□ -1.08
NECTIN1-203ENST00000341398 NUDT10Q8NFP7 164 aa8.32□□□□□ -1.08
NECTIN1-203ENST00000341398 NUDT11Q96G61 164 aa8.32□□□□□ -1.08
NECTIN1-203ENST00000341398 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
NECTIN1-203ENST00000341398 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
NECTIN1-203ENST00000341398 GAGE12HA6NDE8 117 aa8.31□□□□□ -1.08
NECTIN1-203ENST00000341398 NCR2O95944 276 aa8.31□□□□□ -1.08
NECTIN1-203ENST00000341398 H7C423 109 aa8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 SLPIP03973 132 aa8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 BCL2P10415 239 aa8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 CTRLP40313 264 aa8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 RNASEKQ6P5S7 137 aaKnown RBP8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
NECTIN1-203ENST00000341398 TRBV20OR9-2A0A075B6H5 130 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 NDUFS6O75380 124 aaKnown RBP8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 CHTF8P0CG12 524 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 COX6A2Q02221 97 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 PKIGQ9Y2B9 76 aa8.29□□□□□ -1.08
NECTIN1-203ENST00000341398 APCSP02743 223 aa8.28□□□□□ -1.08
NECTIN1-203ENST00000341398 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
NECTIN1-203ENST00000341398 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
NECTIN1-203ENST00000341398 BTF3L4Q96K17 158 aa8.28□□□□□ -1.08
NECTIN1-203ENST00000341398 PMCHP20382 165 aa8.27□□□□□ -1.09
NECTIN1-203ENST00000341398 MAJINQ3KP22 176 aa8.27□□□□□ -1.09
NECTIN1-203ENST00000341398 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
NECTIN1-203ENST00000341398 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
NECTIN1-203ENST00000341398 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
NECTIN1-203ENST00000341398 TRAV26-2A0A0B4J265 109 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 PHOX2AO14813 284 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 ZNF25P17030 456 aaPredicted RBP8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 SLC51BQ86UW2 128 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 OCC1Q8TAD7 63 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 FAM210AQ96ND0 272 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 RNASE7Q9H1E1 156 aaKnown RBP8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
NECTIN1-203ENST00000341398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 IGKV2-24A0A0C4DH68 120 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 IGKV2-29A2NJV5 120 aaPredicted RBP8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 SDHAF1A6NFY7 115 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 A8MWL6 223 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 FGF6P10767 208 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 Q6ZNX1 250 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 STPG4Q8N801 248 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 OR5A1Q8NGJ0 315 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 RPL39LQ96EH5 51 aaKnown RBP8.25□□□□□ -1.09
NECTIN1-203ENST00000341398 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
NECTIN1-203ENST00000341398 I3L3M4 83 aa8.24□□□□□ -1.09
NECTIN1-203ENST00000341398 GATCO43716 136 aaKnown RBP8.24□□□□□ -1.09
NECTIN1-203ENST00000341398 K7EN84 100 aa8.23□□□□□ -1.09
NECTIN1-203ENST00000341398 IGHV1-58A0A0C4DH39 117 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 SS18Q15532 418 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 LYPD6BQ8NI32 183 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 ST20Q9HBF5 79 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 TMEM250H0YL14 139 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 XCL1P47992 114 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 BLOC1S1P78537 153 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 FOXI1Q12951 378 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 FAM231DQ6ZW35 169 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 MRAP2Q96G30 205 aa8.22□□□□□ -1.09
NECTIN1-203ENST00000341398 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.1
NECTIN1-203ENST00000341398 CCL25O15444 150 aa8.21□□□□□ -1.1
NECTIN1-203ENST00000341398 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
NECTIN1-203ENST00000341398 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
NECTIN1-203ENST00000341398 LINC01600Q96MT4 127 aa8.21□□□□□ -1.1
NECTIN1-203ENST00000341398 A0A096LNI7 61 aa8.2□□□□□ -1.1
NECTIN1-203ENST00000341398 FAM231BA6NCW3 169 aa8.2□□□□□ -1.1
NECTIN1-203ENST00000341398 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms