RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 VCYO14598 125 aa8.64□□□□□ -1.03
C2orf88-201ENST00000340623 IGHV4-30-4P0DP06 118 aa8.64□□□□□ -1.03
C2orf88-201ENST00000340623 TRPT1Q86TN4 253 aaKnown RBP8.64□□□□□ -1.03
C2orf88-201ENST00000340623 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
C2orf88-201ENST00000340623 TP53TG1Q9Y2A0 90 aa8.64□□□□□ -1.03
C2orf88-201ENST00000340623 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
C2orf88-201ENST00000340623 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
C2orf88-201ENST00000340623 C2orf91Q6ZV80 131 aa8.63□□□□□ -1.03
C2orf88-201ENST00000340623 C9orf118A6NHY6 69 aa8.63□□□□□ -1.03
C2orf88-201ENST00000340623 SPART-AS1P0CW21 52 aa8.62□□□□□ -1.03
C2orf88-201ENST00000340623 Q6ZTI0 123 aa8.62□□□□□ -1.03
C2orf88-201ENST00000340623 Q8N8P6 123 aa8.62□□□□□ -1.03
C2orf88-201ENST00000340623 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
C2orf88-201ENST00000340623 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
C2orf88-201ENST00000340623 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
C2orf88-201ENST00000340623 SH2D6Q7Z4S9 175 aa8.61□□□□□ -1.03
C2orf88-201ENST00000340623 SPENQ96T58 3664 aaKnown RBP8.61□□□□□ -1.03
C2orf88-201ENST00000340623 PRIMA1Q86XR5 153 aa8.61□□□□□ -1.03
C2orf88-201ENST00000340623 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
C2orf88-201ENST00000340623 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
C2orf88-201ENST00000340623 NOTCH1P46531 2555 aa8.61□□□□□ -1.03
C2orf88-201ENST00000340623 NF1P21359 2839 aa8.61□□□□□ -1.03
C2orf88-201ENST00000340623 K7ERJ3 54 aa8.6□□□□□ -1.03
C2orf88-201ENST00000340623 PAX4O43316 350 aa8.6□□□□□ -1.03
C2orf88-201ENST00000340623 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
C2orf88-201ENST00000340623 NIPBLQ6KC79 2804 aaeCLIP8.6□□□□□ -1.03
C2orf88-201ENST00000340623 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
C2orf88-201ENST00000340623 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
C2orf88-201ENST00000340623 A0A087WX48 190 aa8.59□□□□□ -1.03
C2orf88-201ENST00000340623 WFDC2Q14508 124 aa8.59□□□□□ -1.03
C2orf88-201ENST00000340623 PAPPA-AS1Q5QFB9 102 aa8.59□□□□□ -1.03
C2orf88-201ENST00000340623 FAM222AQ5U5X8 452 aa8.59□□□□□ -1.03
C2orf88-201ENST00000340623 COX8AP10176 69 aa8.59□□□□□ -1.03
C2orf88-201ENST00000340623 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.03
C2orf88-201ENST00000340623 A0A1W2PPM0 123 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 RBMY1BA6NDE4 496 aaKnown RBP8.58□□□□□ -1.04
C2orf88-201ENST00000340623 RBMY1EA6NEQ0 496 aaKnown RBP8.58□□□□□ -1.04
C2orf88-201ENST00000340623 RBMY1DP0C7P1 496 aaKnown RBP8.58□□□□□ -1.04
C2orf88-201ENST00000340623 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 HERV-K104P63124 156 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
C2orf88-201ENST00000340623 ETDBQ3ZM63 59 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 ATP5G1P05496 136 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 LGALS9BQ3B8N2 356 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 LGALS9CQ6DKI2 356 aa8.58□□□□□ -1.04
C2orf88-201ENST00000340623 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 RHOHQ15669 191 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 BEAN1Q3B7T3 259 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
C2orf88-201ENST00000340623 H3BRM9 83 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 LINC01545Q5VT33 79 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 AMTNQ6UX39 209 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 RNF183Q96D59 192 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 TRAV13-1A0A0B4J241 112 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 PRSS29PA6NIE9 313 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 SEC11AP67812 179 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 RETNQ9HD89 108 aa8.57□□□□□ -1.04
C2orf88-201ENST00000340623 I3L3M4 83 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 GYPEP15421 78 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 ZNF479Q96JC4 524 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 CSMD1Q96PZ7 3565 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 C1orf158Q8N1D5 194 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 J3QR89 54 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 P0DMU3 169 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 FAM231AP0DMU4 169 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 FAM231CP0DMU5 169 aa8.56□□□□□ -1.04
C2orf88-201ENST00000340623 CRXO43186 299 aaPredicted RBP8.55□□□□□ -1.04
C2orf88-201ENST00000340623 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
C2orf88-201ENST00000340623 KIR2DL5BQ8NHK3 375 aa8.55□□□□□ -1.04
C2orf88-201ENST00000340623 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
C2orf88-201ENST00000340623 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
C2orf88-201ENST00000340623 MUC4Q99102 2169 aa8.55□□□□□ -1.04
C2orf88-201ENST00000340623 PLNP26678 52 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 C20orf78Q9BR46 151 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 SMIM9A6NGZ8 99 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 GAGE6Q13070 117 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 B5MCH6 92 aa8.54□□□□□ -1.04
C2orf88-201ENST00000340623 F8VRH5 84 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 K7EQD1 137 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 MXRA5Q9NR99 2828 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 SPATA25Q9BR10 227 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 C11orf68Q9H3H3 251 aaKnown RBP8.53□□□□□ -1.04
C2orf88-201ENST00000340623 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 MIFP14174 115 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
C2orf88-201ENST00000340623 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
C2orf88-201ENST00000340623 H3BMG7 143 aa8.52□□□□□ -1.04
C2orf88-201ENST00000340623 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.04
C2orf88-201ENST00000340623 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.04
C2orf88-201ENST00000340623 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.52□□□□□ -1.05
C2orf88-201ENST00000340623 IGKV2-29A2NJV5 120 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms