RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SLURP1P55000 103 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 TCTEX1D4Q5JR98 221 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 ZNF625Q96I27 306 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-201ENST00000340437 B4DSR2 109 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 LGALS9O00182 355 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-201ENST00000340437 FHL3Q13643 280 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 C20orf203Q8NBC4 194 aa10.63□□□□□ -0.71
CPSF7-201ENST00000340437 RHODO00212 210 aa10.62□□□□□ -0.71
CPSF7-201ENST00000340437 TEP1Q99973 2627 aaKnown RBP10.62□□□□□ -0.71
CPSF7-201ENST00000340437 LINC01619G3V211 115 aa10.62□□□□□ -0.71
CPSF7-201ENST00000340437 XGP55808 180 aa10.62□□□□□ -0.71
CPSF7-201ENST00000340437 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
CPSF7-201ENST00000340437 IGLV4-3A0A075B6K6 122 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 SLC25A20O43772 301 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 NXPH4O95158 308 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 PSMB8P28062 276 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 PPDPFLQ8WWR9 84 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 UBE2D3P61077 147 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 UBE2D2P62837 147 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 K7EQG2 157 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 ELANEP08246 267 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 TEN1Q86WV5 123 aa10.61□□□□□ -0.71
CPSF7-201ENST00000340437 K7EMT4 169 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 LEPROTO15243 131 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 RBMY1A1P0DJD3 496 aaKnown RBP10.6□□□□□ -0.71
CPSF7-201ENST00000340437 RBMY1CP0DJD4 496 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 RBMY1FQ15415 496 aaKnown RBP10.6□□□□□ -0.71
CPSF7-201ENST00000340437 UBE2E2Q96LR5 201 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 CDIP1Q9H305 208 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 LINC01587Q99440 93 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 IGHV3-30-3P0DP02 117 aa10.6□□□□□ -0.71
CPSF7-201ENST00000340437 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
CPSF7-201ENST00000340437 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
CPSF7-201ENST00000340437 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-201ENST00000340437 MXRA5Q9NR99 2828 aa10.59□□□□□ -0.71
CPSF7-201ENST00000340437 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
CPSF7-201ENST00000340437 TRBV7-9A0A0J9YWB2 115 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 Q6ZSN1 163 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 AMELXQ99217 191 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 Q6ZUT4 128 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 ITPR2Q14571 2701 aa10.58□□□□□ -0.72
CPSF7-201ENST00000340437 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
CPSF7-201ENST00000340437 TRBV20-1A0A075B6N2 111 aa10.57□□□□□ -0.72
CPSF7-201ENST00000340437 EIF4EBP3O60516 100 aaPredicted RBP10.57□□□□□ -0.72
CPSF7-201ENST00000340437 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
CPSF7-201ENST00000340437 TRBV6-5A0A0K0K1A5 114 aa10.57□□□□□ -0.72
CPSF7-201ENST00000340437 KRTAP10-9P60411 292 aa10.57□□□□□ -0.72
CPSF7-201ENST00000340437 RHOHQ15669 191 aa10.57□□□□□ -0.72
CPSF7-201ENST00000340437 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
CPSF7-201ENST00000340437 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
CPSF7-201ENST00000340437 ATRQ13535 2644 aa10.56□□□□□ -0.72
CPSF7-201ENST00000340437 GCN1Q92616 2671 aaKnown RBP10.56□□□□□ -0.72
CPSF7-201ENST00000340437 CFHR3Q02985 330 aa10.56□□□□□ -0.72
CPSF7-201ENST00000340437 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
CPSF7-201ENST00000340437 ADAMTSL4-AS1Q5T5F5 129 aa10.56□□□□□ -0.72
CPSF7-201ENST00000340437 CRYBA4P53673 196 aa10.55□□□□□ -0.72
CPSF7-201ENST00000340437 NSUN5P1Q3KNT7 163 aa10.55□□□□□ -0.72
CPSF7-201ENST00000340437 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
CPSF7-201ENST00000340437 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
CPSF7-201ENST00000340437 CLEC2BQ92478 149 aa10.55□□□□□ -0.72
CPSF7-201ENST00000340437 Q96MF0 132 aa10.55□□□□□ -0.72
CPSF7-201ENST00000340437 TMEM263Q8WUH6 116 aaKnown RBP10.55□□□□□ -0.72
CPSF7-201ENST00000340437 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
CPSF7-201ENST00000340437 SCGB1A1P11684 91 aa10.54□□□□□ -0.72
CPSF7-201ENST00000340437 TMEM61Q8N0U2 210 aa10.54□□□□□ -0.72
CPSF7-201ENST00000340437 TRIAP1O43715 76 aa10.53□□□□□ -0.72
CPSF7-201ENST00000340437 LINC00467Q9BRT7 94 aa10.53□□□□□ -0.72
CPSF7-201ENST00000340437 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.72
CPSF7-201ENST00000340437 TRAV13-1A0A0B4J241 112 aa10.52□□□□□ -0.73
CPSF7-201ENST00000340437 NDUFA7O95182 113 aa10.52□□□□□ -0.73
CPSF7-201ENST00000340437 LINC01356Q8N9X3 169 aa10.52□□□□□ -0.73
CPSF7-201ENST00000340437 UBR5O95071 2799 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-201ENST00000340437 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-201ENST00000340437 M0R2P5 195 aa10.52□□□□□ -0.73
CPSF7-201ENST00000340437 ATXN8Q156A1 80 aa10.52□□□□□ -0.73
CPSF7-201ENST00000340437 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
CPSF7-201ENST00000340437 C2orf82Q6UX34 121 aa10.51□□□□□ -0.73
CPSF7-201ENST00000340437 RNF183Q96D59 192 aa10.51□□□□□ -0.73
CPSF7-201ENST00000340437 RBMY1BA6NDE4 496 aaKnown RBP10.51□□□□□ -0.73
CPSF7-201ENST00000340437 RBMY1EA6NEQ0 496 aaKnown RBP10.51□□□□□ -0.73
CPSF7-201ENST00000340437 RBMY1DP0C7P1 496 aaKnown RBP10.51□□□□□ -0.73
CPSF7-201ENST00000340437 ANAPC13Q9BS18 74 aa10.51□□□□□ -0.73
CPSF7-201ENST00000340437 PRORYQ9H606 182 aa10.51□□□□□ -0.73
CPSF7-201ENST00000340437 CDKN2A-AS1Q9UH64 79 aa10.51□□□□□ -0.73
CPSF7-201ENST00000340437 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
CPSF7-201ENST00000340437 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
CPSF7-201ENST00000340437 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
CPSF7-201ENST00000340437 H3BMM0 161 aa10.49□□□□□ -0.73
CPSF7-201ENST00000340437 SNCGO76070 127 aa10.49□□□□□ -0.73
CPSF7-201ENST00000340437 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
CPSF7-201ENST00000340437 GATA3P23771 443 aa10.49□□□□□ -0.73
CPSF7-201ENST00000340437 ZFAND6Q6FIF0 208 aa10.49□□□□□ -0.73
CPSF7-201ENST00000340437 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms