RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CRLF1O75462 422 aa11.9□□□□□ -0.5
SCARB1-202ENST00000339570 C20orf203Q8NBC4 194 aa11.9□□□□□ -0.5
SCARB1-202ENST00000339570 MTORP42345 2549 aa11.9□□□□□ -0.5
SCARB1-202ENST00000339570 ADAMTSL4-AS1Q5T5F5 129 aa11.9□□□□□ -0.5
SCARB1-202ENST00000339570 C18orf65Q6ZTR6 163 aa11.9□□□□□ -0.5
SCARB1-202ENST00000339570 A0A0J9YX75 114 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 A6NDX4 124 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 I3L3M4 83 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 DEFB131AP59861 70 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 DEFB112Q30KQ8 113 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 TEX29Q8N6K0 151 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 C11orf44Q8N8P7 122 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
SCARB1-202ENST00000339570 DOPEY1Q5JWR5 2465 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 LEPROTO15243 131 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 TRIAP1O43715 76 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 TRAV4A0A0B4J268 109 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 LGALS9O00182 355 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 RBMY1A1P0DJD3 496 aaKnown RBP11.88□□□□□ -0.51
SCARB1-202ENST00000339570 RBMY1CP0DJD4 496 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 MED14OSP0DP75 135 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 RBMY1FQ15415 496 aaKnown RBP11.88□□□□□ -0.51
SCARB1-202ENST00000339570 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
SCARB1-202ENST00000339570 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
SCARB1-202ENST00000339570 B5MCH6 92 aa11.87□□□□□ -0.51
SCARB1-202ENST00000339570 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
SCARB1-202ENST00000339570 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
SCARB1-202ENST00000339570 Q6ZSN1 163 aa11.87□□□□□ -0.51
SCARB1-202ENST00000339570 NDUFA12Q9UI09 145 aa11.87□□□□□ -0.51
SCARB1-202ENST00000339570 MSMBP08118 114 aa11.87□□□□□ -0.51
SCARB1-202ENST00000339570 SNCGO76070 127 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 ATP6V0E2Q8NHE4 81 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 NXPH4O95158 308 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 SLURP1P55000 103 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
SCARB1-202ENST00000339570 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
SCARB1-202ENST00000339570 C9orf85Q96MD7 179 aa11.85□□□□□ -0.51
SCARB1-202ENST00000339570 IGSF10Q6WRI0 2623 aa11.85□□□□□ -0.51
SCARB1-202ENST00000339570 NDUFA7O95182 113 aa11.85□□□□□ -0.51
SCARB1-202ENST00000339570 ACANP16112 2415 aa11.84□□□□□ -0.51
SCARB1-202ENST00000339570 IGLV1-40P01703 118 aa11.84□□□□□ -0.51
SCARB1-202ENST00000339570 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
SCARB1-202ENST00000339570 IGKV3OR2-268A0A0C4DH90 116 aa11.84□□□□□ -0.51
SCARB1-202ENST00000339570 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
SCARB1-202ENST00000339570 KLK9Q2XQG4 91 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 C10orf105Q8TEF2 133 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 CFHR3Q02985 330 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 ATXN8Q156A1 80 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 UCNP55089 124 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 UBE2E2Q96LR5 201 aa11.83□□□□□ -0.52
SCARB1-202ENST00000339570 LINC01587Q99440 93 aa11.82□□□□□ -0.52
SCARB1-202ENST00000339570 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
SCARB1-202ENST00000339570 K7EQG2 157 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 M0R2P5 195 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 NSUN5P1Q3KNT7 163 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 LINC00467Q9BRT7 94 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 RPL13AP40429 203 aaKnown RBP11.81□□□□□ -0.52
SCARB1-202ENST00000339570 RHOHQ15669 191 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
SCARB1-202ENST00000339570 TRBV6-5A0A0K0K1A5 114 aa11.8□□□□□ -0.52
SCARB1-202ENST00000339570 PSMB8P28062 276 aa11.8□□□□□ -0.52
SCARB1-202ENST00000339570 XCL2Q9UBD3 114 aa11.8□□□□□ -0.52
SCARB1-202ENST00000339570 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
SCARB1-202ENST00000339570 POM121L12Q8N7R1 296 aa11.8□□□□□ -0.52
SCARB1-202ENST00000339570 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
SCARB1-202ENST00000339570 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-202ENST00000339570 AKAP9Q99996 3911 aa11.79□□□□□ -0.52
SCARB1-202ENST00000339570 H3BMM0 161 aa11.79□□□□□ -0.52
SCARB1-202ENST00000339570 UBE2WQ96B02 151 aa11.79□□□□□ -0.52
SCARB1-202ENST00000339570 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
SCARB1-202ENST00000339570 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.52
SCARB1-202ENST00000339570 TMEM262E9PQX1 116 aa11.77□□□□□ -0.52
SCARB1-202ENST00000339570 H3BUA1 57 aa11.77□□□□□ -0.52
SCARB1-202ENST00000339570 CCDC179H3BU77 68 aa11.77□□□□□ -0.53
SCARB1-202ENST00000339570 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.53
SCARB1-202ENST00000339570 K7EMT4 169 aa11.76□□□□□ -0.53
SCARB1-202ENST00000339570 A0A0B4J2C4 111 aa11.76□□□□□ -0.53
SCARB1-202ENST00000339570 TRBV7-9A0A0J9YWB2 115 aa11.76□□□□□ -0.53
SCARB1-202ENST00000339570 COX6CP09669 75 aa11.76□□□□□ -0.53
SCARB1-202ENST00000339570 IGHV1-58A0A0C4DH39 117 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 RBMY1BA6NDE4 496 aaKnown RBP11.75□□□□□ -0.53
SCARB1-202ENST00000339570 RBMY1EA6NEQ0 496 aaKnown RBP11.75□□□□□ -0.53
SCARB1-202ENST00000339570 H7C423 109 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 RBMY1DP0C7P1 496 aaKnown RBP11.75□□□□□ -0.53
SCARB1-202ENST00000339570 TMEM61Q8N0U2 210 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 B4DSR2 109 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 COX6A2Q02221 97 aa11.75□□□□□ -0.53
SCARB1-202ENST00000339570 MEIG1Q5JSS6 88 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms