RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CRYGDP07320 174 aa9.36□□□□□ -0.91
FN1-202ENST00000336916 ODF3L1Q8IXM7 274 aa9.36□□□□□ -0.91
FN1-202ENST00000336916 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
FN1-202ENST00000336916 COX7BP24311 80 aa9.35□□□□□ -0.91
FN1-202ENST00000336916 DEFB125Q8N687 156 aa9.35□□□□□ -0.91
FN1-202ENST00000336916 MIAQ16674 131 aa9.35□□□□□ -0.91
FN1-202ENST00000336916 TEN1Q86WV5 123 aa9.35□□□□□ -0.91
FN1-202ENST00000336916 MTORP42345 2549 aa9.35□□□□□ -0.91
FN1-202ENST00000336916 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
FN1-202ENST00000336916 LMO4P61968 165 aa9.34□□□□□ -0.91
FN1-202ENST00000336916 RITA1Q96K30 269 aa9.34□□□□□ -0.91
FN1-202ENST00000336916 ZNF843Q8N446 348 aa9.33□□□□□ -0.92
FN1-202ENST00000336916 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
FN1-202ENST00000336916 TRAV10A0A0B4J240 114 aa9.33□□□□□ -0.92
FN1-202ENST00000336916 PSMB8P28062 276 aa9.33□□□□□ -0.92
FN1-202ENST00000336916 NDUFC2O95298 119 aa9.33□□□□□ -0.92
FN1-202ENST00000336916 PIK3CD-AS1Q5SR53 167 aa9.32□□□□□ -0.92
FN1-202ENST00000336916 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
FN1-202ENST00000336916 SS18L2Q9UHA2 77 aa9.32□□□□□ -0.92
FN1-202ENST00000336916 POLQO75417 2590 aa9.32□□□□□ -0.92
FN1-202ENST00000336916 TDRG1Q3Y452 100 aa9.32□□□□□ -0.92
FN1-202ENST00000336916 TRAV26-1A0A087WT03 109 aa9.32□□□□□ -0.92
FN1-202ENST00000336916 SPRNQ5BIV9 151 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 ATP5EP2Q5VTU8 51 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 DEFB114Q30KQ6 69 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 A0A0J9YXY3 114 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 REG3AQ06141 175 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 COX17Q14061 63 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 K7ERJ3 54 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 MUSTN1Q8IVN3 82 aa9.31□□□□□ -0.92
FN1-202ENST00000336916 EBI3Q14213 229 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 C20orf203Q8NBC4 194 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 H0Y9J4 135 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 IBA57-AS1B1ANH7 110 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 K7EQG2 157 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 P0DMU3 169 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
FN1-202ENST00000336916 TRBV6-4A0A1B0GX49 114 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 K7ERS5 55 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 MIR7-3HGQ8N6C7 128 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 C14orf132Q9NPU4 83 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 HIST2H2BDQ6DRA6 164 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 ODF1Q14990 250 aa9.29□□□□□ -0.92
FN1-202ENST00000336916 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
FN1-202ENST00000336916 PRRC2CQ9Y520 2896 aaKnown RBP9.29□□□□□ -0.92
FN1-202ENST00000336916 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
FN1-202ENST00000336916 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
FN1-202ENST00000336916 COL4A3Q01955 1670 aa9.28□□□□□ -0.92
FN1-202ENST00000336916 IGLV2-14P01704 120 aa9.28□□□□□ -0.92
FN1-202ENST00000336916 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
FN1-202ENST00000336916 WFDC9Q8NEX5 89 aa9.28□□□□□ -0.92
FN1-202ENST00000336916 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.92
FN1-202ENST00000336916 PATE2Q6UY27 113 aa9.27□□□□□ -0.92
FN1-202ENST00000336916 USP24Q9UPU5 2620 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 UNQ9165/PRO28630Q6UXU0 137 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 MRGPRG-AS1Q2M3A8 158 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 SPATA12Q7Z6I5 190 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 NRGNQ92686 78 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 LINC00322Q6ZN03 302 aaPredicted RBP9.27□□□□□ -0.93
FN1-202ENST00000336916 RPL39P62891 51 aaKnown RBP9.27□□□□□ -0.93
FN1-202ENST00000336916 CASC2Q6XLA1 102 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 LINC00269Q8N2A0 174 aa9.27□□□□□ -0.93
FN1-202ENST00000336916 WIPF3A6NGB9 483 aa9.26□□□□□ -0.93
FN1-202ENST00000336916 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
FN1-202ENST00000336916 CCDC140Q96MF4 163 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 MBD6Q96DN6 1003 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 PRR15LQ9BU68 103 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 TRBV6-8A0A0A6YYG3 113 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 IGKV4-1P06312 121 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 BPY2O14599 106 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 BPTFQ12830 3046 aa9.25□□□□□ -0.93
FN1-202ENST00000336916 IGHV4-28A0A0C4DH34 117 aa9.24□□□□□ -0.93
FN1-202ENST00000336916 A0A1W2PNU3 283 aaPredicted RBP9.24□□□□□ -0.93
FN1-202ENST00000336916 LECT2O14960 151 aa9.24□□□□□ -0.93
FN1-202ENST00000336916 TIMM17BO60830 172 aa9.24□□□□□ -0.93
FN1-202ENST00000336916 CEP295Q9C0D2 2601 aa9.24□□□□□ -0.93
FN1-202ENST00000336916 NCR3O14931 201 aa9.24□□□□□ -0.93
FN1-202ENST00000336916 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
FN1-202ENST00000336916 UBE2D1P51668 147 aa9.24□□□□□ -0.93
FN1-202ENST00000336916 GATA1P15976 413 aaPredicted RBP9.24□□□□□ -0.93
FN1-202ENST00000336916 INAFM1C9JVW0 142 aa9.23□□□□□ -0.93
FN1-202ENST00000336916 P0C879 139 aa9.23□□□□□ -0.93
FN1-202ENST00000336916 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
FN1-202ENST00000336916 CENPFP49454 3210 aa9.23□□□□□ -0.93
FN1-202ENST00000336916 NDUFC1O43677 76 aa9.23□□□□□ -0.93
FN1-202ENST00000336916 NDUFA7O95182 113 aa9.23□□□□□ -0.93
FN1-202ENST00000336916 Q6ZUT4 128 aa9.23□□□□□ -0.93
FN1-202ENST00000336916 A0A087WZ39 114 aa9.22□□□□□ -0.93
FN1-202ENST00000336916 LY6LH3BQJ8 138 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms